Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC137630.3-201ENST00000607245 391 ntBASIC14.69□□□□□ -0.06
NDUFA1O15239 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NDUFA1O15239 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA1O15239 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NDUFA1O15239 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 Z98882.1-201ENST00000622160 2253 ntBASIC14.68□□□□□ -0.06
NDUFA1O15239 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 LINC01960-201ENST00000563759 1884 ntBASIC14.68□□□□□ -0.06
NDUFA1O15239 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NDUFA1O15239 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
NDUFA1O15239 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.68□□□□□ -0.06
NDUFA1O15239 AC103834.1-201ENST00000520383 144 ntBASIC14.68□□□□□ -0.06
NDUFA1O15239 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.68□□□□□ -0.06
NDUFA1O15239 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.68□□□□□ -0.06
NDUFA1O15239 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.68□□□□□ -0.06
NDUFA1O15239 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.68□□□□□ -0.06
NDUFA1O15239 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NDUFA1O15239 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NDUFA1O15239 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NDUFA1O15239 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NDUFA1O15239 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
NDUFA1O15239 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDUFA1O15239 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.67□□□□□ -0.06
NDUFA1O15239 AC005703.6-201ENST00000623265 1329 ntBASIC14.67□□□□□ -0.06
NDUFA1O15239 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.67□□□□□ -0.06
NDUFA1O15239 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NDUFA1O15239 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NDUFA1O15239 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 BX664725.1-201ENST00000438252 379 ntBASIC14.67□□□□□ -0.06
NDUFA1O15239 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.67□□□□□ -0.06
NDUFA1O15239 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.67□□□□□ -0.06
NDUFA1O15239 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.67□□□□□ -0.06
NDUFA1O15239 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDUFA1O15239 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NDUFA1O15239 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFA1O15239 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NDUFA1O15239 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA1O15239 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NDUFA1O15239 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.66□□□□□ -0.06
NDUFA1O15239 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.66□□□□□ -0.06
NDUFA1O15239 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
NDUFA1O15239 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA1O15239 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.66□□□□□ -0.06
NDUFA1O15239 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFA1O15239 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDUFA1O15239 AL157384.1-201ENST00000445995 2473 ntBASIC14.66□□□□□ -0.06
NDUFA1O15239 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFA1O15239 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NDUFA1O15239 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NDUFA1O15239 FEM1AP4-201ENST00000443167 1987 ntBASIC14.65□□□□□ -0.06
NDUFA1O15239 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NDUFA1O15239 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA1O15239 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.65□□□□□ -0.06
NDUFA1O15239 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.65□□□□□ -0.06
NDUFA1O15239 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA1O15239 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NDUFA1O15239 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.65□□□□□ -0.06
NDUFA1O15239 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFA1O15239 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NDUFA1O15239 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
NDUFA1O15239 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFA1O15239 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms