Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 TP73-AS1-205ENST00000587071 737 ntTSL 413.88□□□□□ -0.192e-12■□□□□ 9.9
DDX52Q9Y2R4 TP73-AS1-206ENST00000608600 597 ntTSL 513.47□□□□□ -0.252e-12■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.933e-7■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-209ENST00000470919 827 ntTSL 24.13□□□□□ -1.753e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-212ENST00000566617 572 ntTSL 433.68■■■□□ 2.982e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.662e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.16■■□□□ 1.622e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-205ENST00000563774 566 ntTSL 424.09■■□□□ 1.452e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.42e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-214ENST00000567266 546 ntTSL 423.78■■□□□ 1.42e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-213ENST00000567241 561 ntTSL 421.94■■□□□ 1.12e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-215ENST00000568339 2271 ntTSL 219.49■□□□□ 0.712e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-210ENST00000566115 471 ntTSL 318.17■□□□□ 0.52e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-209ENST00000565078 566 ntTSL 417.37■□□□□ 0.372e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.312e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.71■□□□□ 0.272e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-206ENST00000564544 617 ntTSL 316.03■□□□□ 0.162e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-218ENST00000570123 551 ntTSL 515.84■□□□□ 0.132e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-204ENST00000562929 452 ntTSL 514.79□□□□□ -0.042e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-211ENST00000566405 490 ntTSL 514.13□□□□□ -0.152e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-217ENST00000569997 3946 nt10.63□□□□□ -0.712e-7■□□□□ 9.9
DDX52Q9Y2R4 COX4I1-207ENST00000564648 1235 ntTSL 510.37□□□□□ -0.752e-7■□□□□ 9.9
DDX52Q9Y2R4 EHBP1L1-210ENST00000533465 793 ntTSL 322.51■■□□□ 1.191e-11■□□□□ 9.9
DDX52Q9Y2R4 EHBP1L1-202ENST00000526990 3169 nt13.95□□□□□ -0.181e-11■□□□□ 9.9
DDX52Q9Y2R4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.07■■□□□ 1.124e-6■□□□□ 9.9
DDX52Q9Y2R4 PRKCB-210ENST00000498739 569 ntTSL 419.9■□□□□ 0.784e-6■□□□□ 9.9
DDX52Q9Y2R4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.754e-6■□□□□ 9.9
DDX52Q9Y2R4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.114e-6■□□□□ 9.9
DDX52Q9Y2R4 GABRE-202ENST00000417300 619 ntTSL 213.98□□□□□ -0.172e-13■□□□□ 9.9
DDX52Q9Y2R4 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.724e-6■□□□□ 9.9
DDX52Q9Y2R4 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.734e-6■□□□□ 9.9
DDX52Q9Y2R4 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.754e-6■□□□□ 9.9
DDX52Q9Y2R4 GABRE-203ENST00000441219 1324 ntTSL 210.34□□□□□ -0.752e-13■□□□□ 9.9
DDX52Q9Y2R4 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.972e-13■□□□□ 9.9
DDX52Q9Y2R4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.036e-11■□□□□ 9.8
DDX52Q9Y2R4 RNA5SP225-201ENST00000410874 135 ntBASIC-1.23□□□□□ -2.617e-16■□□□□ 9.8
DDX52Q9Y2R4 ANP32A-201ENST00000267918 1084 ntTSL 317.84■□□□□ 0.452e-9■□□□□ 9.7
DDX52Q9Y2R4 ANP32A-205ENST00000483221 420 ntTSL 316.91■□□□□ 0.32e-9■□□□□ 9.7
DDX52Q9Y2R4 ANP32A-209ENST00000495764 504 ntTSL 516.91■□□□□ 0.32e-9■□□□□ 9.7
DDX52Q9Y2R4 CCT7-204ENST00000409924 567 ntTSL 323.86■■□□□ 1.412e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-211ENST00000480489 527 ntTSL 223.86■■□□□ 1.412e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.12■■□□□ 1.292e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-203ENST00000399032 593 ntTSL 423.12■■□□□ 1.292e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.71■□□□□ 0.752e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-208ENST00000471927 556 ntTSL 419.42■□□□□ 0.72e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-209ENST00000473197 595 ntTSL 419.42■□□□□ 0.72e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-206ENST00000464397 583 ntTSL 219.11■□□□□ 0.652e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.73■□□□□ 0.592e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-205ENST00000461290 1018 ntTSL 217.69■□□□□ 0.422e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-207ENST00000469844 612 ntTSL 417.19■□□□□ 0.342e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.272e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-210ENST00000473786 811 ntTSL 511.58□□□□□ -0.562e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-212ENST00000482064 567 ntTSL 410.24□□□□□ -0.772e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-214ENST00000492253 531 ntTSL 48.11□□□□□ -1.112e-7■□□□□ 9.7
DDX52Q9Y2R4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.56□□□□□ -1.682e-7■□□□□ 9.7
DDX52Q9Y2R4 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.633e-32■□□□□ 9.7
DDX52Q9Y2R4 ST3GAL2-204ENST00000566097 904 ntTSL 232.82■■■□□ 2.845e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-223ENST00000492275 769 ntTSL 330.69■■■□□ 2.55e-6■□□□□ 9.7
DDX52Q9Y2R4 ST3GAL2-205ENST00000567586 557 ntTSL 429.7■■■□□ 2.355e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.85■■■□□ 2.215e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-212ENST00000463216 842 ntTSL 528.51■■■□□ 2.155e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-224ENST00000494243 861 ntTSL 528.41■■■□□ 2.145e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-217ENST00000481605 1540 ntTSL 527.87■■■□□ 2.055e-6■□□□□ 9.7
DDX52Q9Y2R4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.755e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-210ENST00000450533 2451 ntTSL 1 (best)25.26■■□□□ 1.635e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-212ENST00000480679 505 ntTSL 524.65■■□□□ 1.545e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-223ENST00000493222 864 ntTSL 324.65■■□□□ 1.545e-6■□□□□ 9.7
DDX52Q9Y2R4 FOXK2-204ENST00000527313 779 ntTSL 324.17■■□□□ 1.465e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-227ENST00000497510 722 ntTSL 423.94■■□□□ 1.425e-6■□□□□ 9.7
DDX52Q9Y2R4 ESPN-213ENST00000632803 455 ntTSL 323.47■■□□□ 1.355e-6■□□□□ 9.7
DDX52Q9Y2R4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.85■■□□□ 1.255e-6■□□□□ 9.7
DDX52Q9Y2R4 ESPN-212ENST00000632593 506 ntTSL 222.83■■□□□ 1.255e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-213ENST00000482668 645 ntTSL 322.11■■□□□ 1.135e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-219ENST00000487469 1015 ntTSL 522.04■■□□□ 1.125e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.85■■□□□ 1.095e-6■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-203ENST00000435527 746 ntTSL 321.56■■□□□ 1.045e-6■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-210ENST00000513033 567 ntTSL 421.56■■□□□ 1.045e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-215ENST00000483461 495 ntTSL 421.51■■□□□ 1.035e-6■□□□□ 9.7
DDX52Q9Y2R4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.5■■□□□ 1.035e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-205ENST00000466642 1023 ntTSL 421.33■■□□□ 1.015e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.27■□□□□ 0.845e-6■□□□□ 9.7
DDX52Q9Y2R4 ST3GAL2-203ENST00000561708 581 ntTSL 420.26■□□□□ 0.835e-6■□□□□ 9.7
DDX52Q9Y2R4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.93■□□□□ 0.785e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-214ENST00000483108 598 ntTSL 419.57■□□□□ 0.725e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-217ENST00000484142 553 ntTSL 419.57■□□□□ 0.725e-6■□□□□ 9.7
DDX52Q9Y2R4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.675e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-206ENST00000467400 717 ntTSL 519.06■□□□□ 0.645e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-209ENST00000438055 3606 ntTSL 518.85■□□□□ 0.615e-6■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-208ENST00000509151 476 ntTSL 418.84■□□□□ 0.615e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-207ENST00000418766 3771 ntTSL 517.91■□□□□ 0.465e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.443e-13■□□□□ 9.7
DDX52Q9Y2R4 RTN4-210ENST00000427710 589 ntTSL 417.68■□□□□ 0.425e-6■□□□□ 9.7
DDX52Q9Y2R4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.335e-6■□□□□ 9.7
DDX52Q9Y2R4 TTC3-219ENST00000485402 3626 ntTSL 516.59■□□□□ 0.255e-6■□□□□ 9.7
DDX52Q9Y2R4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.46■□□□□ 0.225e-6■□□□□ 9.7
DDX52Q9Y2R4 FOXK2-207ENST00000570585 756 ntTSL 316.34■□□□□ 0.215e-6■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.155e-6■□□□□ 9.7
DDX52Q9Y2R4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.115e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-214ENST00000548273 818 ntTSL 315.36■□□□□ 0.053e-13■□□□□ 9.7
DDX52Q9Y2R4 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.015e-6■□□□□ 9.7
Retrieved 100 of 4,483 protein–RNA pairs in 121.9 ms