RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 NISCHQ9Y2I1 1504 aa37.21■■■■□ 3.55
COX4I1-215ENST00000568339 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
COX4I1-215ENST00000568339 ZCCHC6Q5VYS8 1495 aaKnown RBP31.34■■■□□ 2.61
COX4I1-215ENST00000568339 DCAF1Q9Y4B6 1507 aa30.84■■■□□ 2.53
COX4I1-215ENST00000568339 SHROOM4Q9ULL8 1493 aa30.41■■■□□ 2.46
COX4I1-215ENST00000568339 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
COX4I1-215ENST00000568339 MYO15BQ96JP2 1530 aa30.36■■■□□ 2.45
COX4I1-215ENST00000568339 ABCC9O60706 1549 aa30.14■■■□□ 2.42
COX4I1-215ENST00000568339 NACADO15069 1562 aa30.02■■■□□ 2.4
COX4I1-215ENST00000568339 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
COX4I1-215ENST00000568339 RB1CC1Q8TDY2 1594 aa29.66■■■□□ 2.34
COX4I1-215ENST00000568339 SUPT5HO00267 1087 aaKnown RBP29.42■■■□□ 2.3
COX4I1-215ENST00000568339 UNC13AQ9UPW8 1703 aa29.12■■■□□ 2.25
COX4I1-215ENST00000568339 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
COX4I1-215ENST00000568339 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
COX4I1-215ENST00000568339 BICRAQ9NZM4 1560 aa28.78■■■□□ 2.2
COX4I1-215ENST00000568339 MROH2BQ7Z745 1585 aa28.73■■■□□ 2.19
COX4I1-215ENST00000568339 BAZ1AQ9NRL2 1556 aaPredicted RBP28.7■■■□□ 2.19
COX4I1-215ENST00000568339 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
COX4I1-215ENST00000568339 WIZO95785 1651 aa28.52■■■□□ 2.16
COX4I1-215ENST00000568339 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
COX4I1-215ENST00000568339 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
COX4I1-215ENST00000568339 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.12
COX4I1-215ENST00000568339 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
COX4I1-215ENST00000568339 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
COX4I1-215ENST00000568339 ATAD2BQ9ULI0 1458 aa27.97■■■□□ 2.07
COX4I1-215ENST00000568339 EIF4G1Q04637 1599 aaKnown RBP27.97■■■□□ 2.07
COX4I1-215ENST00000568339 CCDC88BA6NC98 1476 aa27.94■■■□□ 2.06
COX4I1-215ENST00000568339 BAZ1BQ9UIG0 1483 aaKnown RBP27.8■■■□□ 2.04
COX4I1-215ENST00000568339 HMGXB3Q12766 1538 aa27.7■■■□□ 2.03
COX4I1-215ENST00000568339 NCAPD3P42695 1498 aa27.7■■■□□ 2.02
COX4I1-215ENST00000568339 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
COX4I1-215ENST00000568339 ABCC8Q09428 1581 aa27.44■■□□□ 1.98
COX4I1-215ENST00000568339 CC2D2AQ9P2K1 1620 aa27.35■■□□□ 1.97
COX4I1-215ENST00000568339 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
COX4I1-215ENST00000568339 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.951e-6■□□□□ 10.2
COX4I1-215ENST00000568339 CFTRP13569 1480 aa27.16■■□□□ 1.94
COX4I1-215ENST00000568339 SYNJ1O43426 1573 aa27.14■■□□□ 1.94
COX4I1-215ENST00000568339 PRDM2Q13029 1718 aa27.12■■□□□ 1.93
COX4I1-215ENST00000568339 FAM9AQ8IZU1 332 aaPredicted RBP27.12■■□□□ 1.93
COX4I1-215ENST00000568339 HRCP23327 699 aa27.09■■□□□ 1.93
COX4I1-215ENST00000568339 EEA1Q15075 1411 aa27.08■■□□□ 1.93
COX4I1-215ENST00000568339 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
COX4I1-215ENST00000568339 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
COX4I1-215ENST00000568339 SOGA1O94964 1423 aa26.99■■□□□ 1.91
COX4I1-215ENST00000568339 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
COX4I1-215ENST00000568339 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
COX4I1-215ENST00000568339 CUX1P39880 1505 aa26.85■■□□□ 1.89
COX4I1-215ENST00000568339 CSRNP3Q8WYN3 585 aa26.82■■□□□ 1.88
COX4I1-215ENST00000568339 KIF21BO75037 1637 aa26.73■■□□□ 1.87
COX4I1-215ENST00000568339 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.86
COX4I1-215ENST00000568339 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
COX4I1-215ENST00000568339 TNIKQ9UKE5 1360 aa26.67■■□□□ 1.86
COX4I1-215ENST00000568339 FANCD2Q9BXW9 1451 aa26.66■■□□□ 1.86
COX4I1-215ENST00000568339 CEP164Q9UPV0 1460 aa26.65■■□□□ 1.86
COX4I1-215ENST00000568339 EHMT2Q96KQ7 1210 aa26.65■■□□□ 1.86
COX4I1-215ENST00000568339 NESP48681 1621 aa26.59■■□□□ 1.85
COX4I1-215ENST00000568339 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
COX4I1-215ENST00000568339 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
COX4I1-215ENST00000568339 CEP162Q5TB80 1403 aa26.52■■□□□ 1.84
COX4I1-215ENST00000568339 FGD5Q6ZNL6 1462 aa26.48■■□□□ 1.83
COX4I1-215ENST00000568339 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
COX4I1-215ENST00000568339 PCGF6Q9BYE7 350 aa26.48■■□□□ 1.83
COX4I1-215ENST00000568339 PRXQ9BXM0 1461 aa26.47■■□□□ 1.83
COX4I1-215ENST00000568339 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
COX4I1-215ENST00000568339 RAPGEF2Q9Y4G8 1499 aa26.44■■□□□ 1.82
COX4I1-215ENST00000568339 UBTFP17480 764 aaKnown RBP26.44■■□□□ 1.82
COX4I1-215ENST00000568339 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
COX4I1-215ENST00000568339 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
COX4I1-215ENST00000568339 PPARGC1BQ86YN6 1023 aaKnown RBP26.42■■□□□ 1.82
COX4I1-215ENST00000568339 TRIM26Q12899 539 aaPredicted RBP26.37■■□□□ 1.81
COX4I1-215ENST00000568339 CUX2O14529 1486 aa26.35■■□□□ 1.81
COX4I1-215ENST00000568339 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
COX4I1-215ENST00000568339 URB2Q14146 1524 aaKnown RBP26.32■■□□□ 1.8
COX4I1-215ENST00000568339 POLA1P09884 1462 aaPredicted RBP26.32■■□□□ 1.8
COX4I1-215ENST00000568339 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
COX4I1-215ENST00000568339 IGF1RP08069 1367 aa26.25■■□□□ 1.79
COX4I1-215ENST00000568339 CLIP1P30622 1438 aa26.24■■□□□ 1.79
COX4I1-215ENST00000568339 WDR97A6NE52 1622 aa26.23■■□□□ 1.79
COX4I1-215ENST00000568339 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.79
COX4I1-215ENST00000568339 CARMIL1Q5VZK9 1371 aa26.11■■□□□ 1.77
COX4I1-215ENST00000568339 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
COX4I1-215ENST00000568339 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
COX4I1-215ENST00000568339 CUL7Q14999 1698 aa26.08■■□□□ 1.77
COX4I1-215ENST00000568339 ABCA5Q8WWZ7 1642 aa26.08■■□□□ 1.77
COX4I1-215ENST00000568339 TARBP1Q13395 1621 aaKnown RBP26.05■■□□□ 1.76
COX4I1-215ENST00000568339 WDR62O43379 1518 aa25.98■■□□□ 1.75
COX4I1-215ENST00000568339 ARAP1Q96P48 1450 aa25.97■■□□□ 1.75
COX4I1-215ENST00000568339 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
COX4I1-215ENST00000568339 ARHGAP35Q9NRY4 1499 aa25.9■■□□□ 1.74
COX4I1-215ENST00000568339 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
COX4I1-215ENST00000568339 PELP1Q8IZL8 1130 aaKnown RBP25.87■■□□□ 1.73
COX4I1-215ENST00000568339 CTTNBP2Q8WZ74 1663 aa25.84■■□□□ 1.73
COX4I1-215ENST00000568339 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
COX4I1-215ENST00000568339 IFT140Q96RY7 1462 aa25.83■■□□□ 1.73
COX4I1-215ENST00000568339 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
COX4I1-215ENST00000568339 RANGAP1P46060 587 aaPredicted RBP25.81■■□□□ 1.72
COX4I1-215ENST00000568339 ERCC6Q03468 1493 aa25.8■■□□□ 1.72
COX4I1-215ENST00000568339 EFCAB5A4FU69 1503 aa25.74■■□□□ 1.71
COX4I1-215ENST00000568339 APLP2Q06481 763 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms