RNA–Protein interactions for RNA: ENST00000566115.5

COX4I1-210, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 3

Gene COX4I1, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-210ENST00000566115 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
COX4I1-210ENST00000566115 CCDC180Q9P1Z9 1646 aa32.42■■■□□ 2.78
COX4I1-210ENST00000566115 ABCC9O60706 1549 aa31.19■■■□□ 2.58
COX4I1-210ENST00000566115 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
COX4I1-210ENST00000566115 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
COX4I1-210ENST00000566115 NACADO15069 1562 aa30.39■■■□□ 2.46
COX4I1-210ENST00000566115 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
COX4I1-210ENST00000566115 RB1CC1Q8TDY2 1594 aa30.32■■■□□ 2.44
COX4I1-210ENST00000566115 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
COX4I1-210ENST00000566115 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
COX4I1-210ENST00000566115 SCRIBQ14160 1630 aa29.45■■■□□ 2.3
COX4I1-210ENST00000566115 BICRAQ9NZM4 1560 aa29.28■■■□□ 2.28
COX4I1-210ENST00000566115 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
COX4I1-210ENST00000566115 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
COX4I1-210ENST00000566115 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
COX4I1-210ENST00000566115 EIF4G1Q04637 1599 aaKnown RBP28.52■■■□□ 2.16
COX4I1-210ENST00000566115 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
COX4I1-210ENST00000566115 CECR2Q9BXF3 1484 aa28.32■■■□□ 2.12
COX4I1-210ENST00000566115 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
COX4I1-210ENST00000566115 SMARCA4P51532 1647 aa28.28■■■□□ 2.12
COX4I1-210ENST00000566115 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
COX4I1-210ENST00000566115 SMARCA2P51531 1590 aa28.08■■■□□ 2.09
COX4I1-210ENST00000566115 PEG3Q9GZU2 1588 aa28.06■■■□□ 2.08
COX4I1-210ENST00000566115 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
COX4I1-210ENST00000566115 NCAPD3P42695 1498 aa28.01■■■□□ 2.07
COX4I1-210ENST00000566115 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
COX4I1-210ENST00000566115 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
COX4I1-210ENST00000566115 BAZ1BQ9UIG0 1483 aaKnown RBP27.83■■■□□ 2.05
COX4I1-210ENST00000566115 WIZO95785 1651 aa27.81■■■□□ 2.04
COX4I1-210ENST00000566115 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
COX4I1-210ENST00000566115 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
COX4I1-210ENST00000566115 LAMC3Q9Y6N6 1575 aa27.24■■□□□ 1.95
COX4I1-210ENST00000566115 CCDC88BA6NC98 1476 aa27.24■■□□□ 1.95
COX4I1-210ENST00000566115 CADPSQ9ULU8 1353 aa27.19■■□□□ 1.94
COX4I1-210ENST00000566115 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
COX4I1-210ENST00000566115 CFTRP13569 1480 aa27.11■■□□□ 1.93
COX4I1-210ENST00000566115 NESP48681 1621 aa27.06■■□□□ 1.92
COX4I1-210ENST00000566115 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
COX4I1-210ENST00000566115 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
COX4I1-210ENST00000566115 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
COX4I1-210ENST00000566115 CUX2O14529 1486 aa26.89■■□□□ 1.9
COX4I1-210ENST00000566115 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
COX4I1-210ENST00000566115 KIF21AQ7Z4S6 1674 aa26.83■■□□□ 1.89
COX4I1-210ENST00000566115 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
COX4I1-210ENST00000566115 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
COX4I1-210ENST00000566115 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
COX4I1-210ENST00000566115 ABCC8Q09428 1581 aa26.62■■□□□ 1.85
COX4I1-210ENST00000566115 WDR62O43379 1518 aa26.6■■□□□ 1.85
COX4I1-210ENST00000566115 URB2Q14146 1524 aaKnown RBP26.51■■□□□ 1.83
COX4I1-210ENST00000566115 DNMBPQ6XZF7 1577 aa26.5■■□□□ 1.83
COX4I1-210ENST00000566115 TOPBP1Q92547 1522 aa26.45■■□□□ 1.83
COX4I1-210ENST00000566115 WRNQ14191 1432 aaPredicted RBP eCLIP26.38■■□□□ 1.811e-6■□□□□ 10.2
COX4I1-210ENST00000566115 CUX1P39880 1505 aa26.34■■□□□ 1.81
COX4I1-210ENST00000566115 TOP2BQ02880 1626 aa26.29■■□□□ 1.8
COX4I1-210ENST00000566115 BIVM-ERCC5R4GMW8 1640 aa26.29■■□□□ 1.8
COX4I1-210ENST00000566115 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
COX4I1-210ENST00000566115 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
COX4I1-210ENST00000566115 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
COX4I1-210ENST00000566115 SYNJ1O43426 1573 aa26.21■■□□□ 1.79
COX4I1-210ENST00000566115 SOGA1O94964 1423 aa26.16■■□□□ 1.78
COX4I1-210ENST00000566115 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.77
COX4I1-210ENST00000566115 WDR97A6NE52 1622 aa26.11■■□□□ 1.77
COX4I1-210ENST00000566115 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
COX4I1-210ENST00000566115 ABCA10Q8WWZ4 1543 aa26.05■■□□□ 1.76
COX4I1-210ENST00000566115 TRIM41Q8WV44 630 aa25.98■■□□□ 1.75
COX4I1-210ENST00000566115 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
COX4I1-210ENST00000566115 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.75
COX4I1-210ENST00000566115 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
COX4I1-210ENST00000566115 AQRO60306 1485 aaKnown RBP eCLIP25.89■■□□□ 1.732e-17■■■■■ 32.9
COX4I1-210ENST00000566115 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
COX4I1-210ENST00000566115 GAPVD1Q14C86 1478 aa25.88■■□□□ 1.73
COX4I1-210ENST00000566115 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
COX4I1-210ENST00000566115 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
COX4I1-210ENST00000566115 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
COX4I1-210ENST00000566115 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
COX4I1-210ENST00000566115 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
COX4I1-210ENST00000566115 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
COX4I1-210ENST00000566115 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.7
COX4I1-210ENST00000566115 EEA1Q15075 1411 aa25.65■■□□□ 1.7
COX4I1-210ENST00000566115 OSCARQ8IYS5 282 aa25.65■■□□□ 1.7
COX4I1-210ENST00000566115 SYNJ2O15056 1496 aa25.63■■□□□ 1.69
COX4I1-210ENST00000566115 CUL7Q14999 1698 aa25.62■■□□□ 1.69
COX4I1-210ENST00000566115 IGF1RP08069 1367 aa25.62■■□□□ 1.69
COX4I1-210ENST00000566115 FHAD1B1AJZ9 1412 aa25.62■■□□□ 1.69
COX4I1-210ENST00000566115 ADAMTS12P58397 1594 aa25.61■■□□□ 1.69
COX4I1-210ENST00000566115 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
COX4I1-210ENST00000566115 CHD1O14646 1710 aa25.55■■□□□ 1.68
COX4I1-210ENST00000566115 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
COX4I1-210ENST00000566115 FBLN2P98095 1184 aa25.51■■□□□ 1.67
COX4I1-210ENST00000566115 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
COX4I1-210ENST00000566115 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
COX4I1-210ENST00000566115 CSRNP3Q8WYN3 585 aa25.46■■□□□ 1.67
COX4I1-210ENST00000566115 RAPGEF2Q9Y4G8 1499 aa25.41■■□□□ 1.66
COX4I1-210ENST00000566115 PRXQ9BXM0 1461 aa25.39■■□□□ 1.65
COX4I1-210ENST00000566115 NUP160Q12769 1436 aa25.37■■□□□ 1.65
COX4I1-210ENST00000566115 CLASP1Q7Z460 1538 aa25.3■■□□□ 1.64
COX4I1-210ENST00000566115 CEP170Q5SW79 1584 aa25.3■■□□□ 1.64
COX4I1-210ENST00000566115 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
COX4I1-210ENST00000566115 KIF21BO75037 1637 aa25.28■■□□□ 1.64
COX4I1-210ENST00000566115 KIAA0586Q9BVV6 1533 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms