RNA–Protein interactions for RNA: ENST00000561569.5

COX4I1-202, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COX4I1, Length 716 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-202ENST00000561569 NISCHQ9Y2I1 1504 aa48.7■■■■■ 5.39
COX4I1-202ENST00000561569 CCDC180Q9P1Z9 1646 aa43.29■■■■■ 4.52
COX4I1-202ENST00000561569 ABCC9O60706 1549 aa42.48■■■■■ 4.39
COX4I1-202ENST00000561569 RB1CC1Q8TDY2 1594 aa40.79■■■■■ 4.12
COX4I1-202ENST00000561569 DCAF8L2P0C7V8 631 aa40.74■■■■■ 4.11
COX4I1-202ENST00000561569 NACADO15069 1562 aa40.74■■■■■ 4.11
COX4I1-202ENST00000561569 ZCCHC6Q5VYS8 1495 aaKnown RBP40.57■■■■■ 4.08
COX4I1-202ENST00000561569 MYO15BQ96JP2 1530 aa40.47■■■■■ 4.07
COX4I1-202ENST00000561569 DCAF1Q9Y4B6 1507 aa40.27■■■■■ 4.04
COX4I1-202ENST00000561569 UNC13AQ9UPW8 1703 aa39.82■■■■□ 3.96
COX4I1-202ENST00000561569 PABPN1Q86U42 306 aaKnown RBP eCLIP39.69■■■■□ 3.94
COX4I1-202ENST00000561569 BICRAQ9NZM4 1560 aa39.57■■■■□ 3.92
COX4I1-202ENST00000561569 SCRIBQ14160 1630 aa39.54■■■■□ 3.92
COX4I1-202ENST00000561569 SHROOM4Q9ULL8 1493 aa39.13■■■■□ 3.85
COX4I1-202ENST00000561569 DNAJC5BQ9UF47 199 aa39.04■■■■□ 3.84
COX4I1-202ENST00000561569 EIF4G1Q04637 1599 aaKnown RBP38.54■■■■□ 3.76
COX4I1-202ENST00000561569 CC2D2AQ9P2K1 1620 aa38.39■■■■□ 3.74
COX4I1-202ENST00000561569 CECR2Q9BXF3 1484 aa38.16■■■■□ 3.7
COX4I1-202ENST00000561569 SMARCA4P51532 1647 aa37.79■■■■□ 3.64
COX4I1-202ENST00000561569 BAZ1AQ9NRL2 1556 aaPredicted RBP37.75■■■■□ 3.63
COX4I1-202ENST00000561569 ATAD2BQ9ULI0 1458 aa37.63■■■■□ 3.61
COX4I1-202ENST00000561569 NCAPD3P42695 1498 aa37.6■■■■□ 3.61
COX4I1-202ENST00000561569 SMARCA2P51531 1590 aa37.55■■■■□ 3.6
COX4I1-202ENST00000561569 MROH2BQ7Z745 1585 aa37.55■■■■□ 3.6
COX4I1-202ENST00000561569 PEG3Q9GZU2 1588 aa37.42■■■■□ 3.58
COX4I1-202ENST00000561569 HMGXB3Q12766 1538 aa37.41■■■■□ 3.58
COX4I1-202ENST00000561569 BAZ1BQ9UIG0 1483 aaKnown RBP37.31■■■■□ 3.56
COX4I1-202ENST00000561569 WIZO95785 1651 aa37.12■■■■□ 3.53
COX4I1-202ENST00000561569 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
COX4I1-202ENST00000561569 TOP2AP11388 1531 aaKnown RBP36.74■■■■□ 3.47
COX4I1-202ENST00000561569 NESP48681 1621 aa36.74■■■■□ 3.47
COX4I1-202ENST00000561569 ERCC6Q03468 1493 aa36.61■■■■□ 3.45
COX4I1-202ENST00000561569 LAMC3Q9Y6N6 1575 aa36.61■■■■□ 3.45
COX4I1-202ENST00000561569 CADPSQ9ULU8 1353 aa36.51■■■■□ 3.43
COX4I1-202ENST00000561569 PDS5BQ9NTI5 1447 aa36.38■■■■□ 3.41
COX4I1-202ENST00000561569 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
COX4I1-202ENST00000561569 CFTRP13569 1480 aa36.28■■■■□ 3.4
COX4I1-202ENST00000561569 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.39
COX4I1-202ENST00000561569 CUX2O14529 1486 aa36.23■■■■□ 3.39
COX4I1-202ENST00000561569 THOC2Q8NI27 1593 aaKnown RBP36.18■■■■□ 3.38
COX4I1-202ENST00000561569 SUPT5HO00267 1087 aaKnown RBP36.14■■■■□ 3.38
COX4I1-202ENST00000561569 FANCD2Q9BXW9 1451 aa36.1■■■■□ 3.37
COX4I1-202ENST00000561569 CEP164Q9UPV0 1460 aa36.05■■■■□ 3.36
COX4I1-202ENST00000561569 MRC2Q9UBG0 1479 aa36.02■■■■□ 3.36
COX4I1-202ENST00000561569 PRDM2Q13029 1718 aa35.92■■■■□ 3.34
COX4I1-202ENST00000561569 WDR62O43379 1518 aa35.89■■■■□ 3.34
COX4I1-202ENST00000561569 URB2Q14146 1524 aaKnown RBP35.74■■■■□ 3.31
COX4I1-202ENST00000561569 TOPBP1Q92547 1522 aa35.52■■■■□ 3.28
COX4I1-202ENST00000561569 ABCC8Q09428 1581 aa35.48■■■■□ 3.27
COX4I1-202ENST00000561569 DNMBPQ6XZF7 1577 aa35.46■■■■□ 3.27
COX4I1-202ENST00000561569 IFT140Q96RY7 1462 aa35.3■■■■□ 3.24
COX4I1-202ENST00000561569 CUX1P39880 1505 aa35.22■■■■□ 3.23
COX4I1-202ENST00000561569 POLA1P09884 1462 aaPredicted RBP35.21■■■■□ 3.23
COX4I1-202ENST00000561569 DNAJC5Q9H3Z4 198 aa35.19■■■■□ 3.22
COX4I1-202ENST00000561569 ZNF608Q9ULD9 1512 aaPredicted RBP35.16■■■■□ 3.22
COX4I1-202ENST00000561569 FGD5Q6ZNL6 1462 aa35.12■■■■□ 3.21
COX4I1-202ENST00000561569 TARBP1Q13395 1621 aaKnown RBP35.1■■■■□ 3.21
COX4I1-202ENST00000561569 RAD54L2Q9Y4B4 1467 aa35.07■■■■□ 3.2
COX4I1-202ENST00000561569 SOGA1O94964 1423 aa35.06■■■■□ 3.2
COX4I1-202ENST00000561569 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
COX4I1-202ENST00000561569 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.191e-6■□□□□ 10.2
COX4I1-202ENST00000561569 AQRO60306 1485 aaKnown RBP eCLIP34.95■■■■□ 3.196e-9■■■■■ 43.9
COX4I1-202ENST00000561569 SYNJ1O43426 1573 aa34.89■■■■□ 3.18
COX4I1-202ENST00000561569 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
COX4I1-202ENST00000561569 TDRD9Q8NDG6 1382 aaKnown RBP34.88■■■■□ 3.17
COX4I1-202ENST00000561569 BIVM-ERCC5R4GMW8 1640 aa34.88■■■■□ 3.17
COX4I1-202ENST00000561569 WDR97A6NE52 1622 aa34.81■■■■□ 3.16
COX4I1-202ENST00000561569 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.16
COX4I1-202ENST00000561569 OSCARQ8IYS5 282 aa34.72■■■■□ 3.15
COX4I1-202ENST00000561569 GRIN2BQ13224 1484 aa34.66■■■■□ 3.14
COX4I1-202ENST00000561569 GAPVD1Q14C86 1478 aa34.65■■■■□ 3.14
COX4I1-202ENST00000561569 SNAPC4Q5SXM2 1469 aa34.64■■■■□ 3.14
COX4I1-202ENST00000561569 ABCA5Q8WWZ7 1642 aa34.63■■■■□ 3.13
COX4I1-202ENST00000561569 MAGI1Q96QZ7 1491 aaPredicted RBP34.56■■■■□ 3.12
COX4I1-202ENST00000561569 PBRM1Q86U86 1689 aa34.55■■■■□ 3.12
COX4I1-202ENST00000561569 FBLN2P98095 1184 aa34.55■■■■□ 3.12
COX4I1-202ENST00000561569 CHD1O14646 1710 aa34.54■■■■□ 3.12
COX4I1-202ENST00000561569 CHMP7Q8WUX9 453 aaPredicted RBP34.44■■■■□ 3.1
COX4I1-202ENST00000561569 SYNJ2O15056 1496 aa34.44■■■■□ 3.1
COX4I1-202ENST00000561569 ERICH3Q5RHP9 1530 aa34.34■■■■□ 3.09
COX4I1-202ENST00000561569 ADAMTS12P58397 1594 aa34.31■■■■□ 3.08
COX4I1-202ENST00000561569 FHAD1B1AJZ9 1412 aa34.26■■■■□ 3.07
COX4I1-202ENST00000561569 KIF27Q86VH2 1401 aa34.25■■■■□ 3.07
COX4I1-202ENST00000561569 GRIN2AQ12879 1464 aa34.21■■■■□ 3.07
COX4I1-202ENST00000561569 CLASP1Q7Z460 1538 aa34.2■■■■□ 3.07
COX4I1-202ENST00000561569 ARHGEF11O15085 1522 aa34.17■■■■□ 3.06
COX4I1-202ENST00000561569 RIMBP3CA6NJZ7 1639 aa34.16■■■■□ 3.06
COX4I1-202ENST00000561569 RIMBP3BA6NNM3 1639 aa34.16■■■■□ 3.06
COX4I1-202ENST00000561569 RIMBP3Q9UFD9 1639 aa34.16■■■■□ 3.06
COX4I1-202ENST00000561569 IGF1RP08069 1367 aa34.12■■■■□ 3.05
COX4I1-202ENST00000561569 TRIM41Q8WV44 630 aa34.12■■■■□ 3.05
COX4I1-202ENST00000561569 NUP160Q12769 1436 aa34.07■■■■□ 3.04
COX4I1-202ENST00000561569 CEP170Q5SW79 1584 aa34.05■■■■□ 3.04
COX4I1-202ENST00000561569 CUL7Q14999 1698 aa34■■■■□ 3.03
COX4I1-202ENST00000561569 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
COX4I1-202ENST00000561569 CARMIL1Q5VZK9 1371 aa33.92■■■■□ 3.02
COX4I1-202ENST00000561569 ARAP1Q96P48 1450 aa33.9■■■■□ 3.02
COX4I1-202ENST00000561569 CYB5RLQ6IPT4 315 aa33.86■■■■□ 3.01
COX4I1-202ENST00000561569 SHROOM2Q13796 1616 aa33.79■■■■□ 3
COX4I1-202ENST00000561569 ERCC6L2Q5T890 1561 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms