RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
CLOCK-211ENST00000513440 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
CLOCK-211ENST00000513440 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
CLOCK-211ENST00000513440 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
CLOCK-211ENST00000513440 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
CLOCK-211ENST00000513440 CCDC180Q9P1Z9 1646 aa24.44■■□□□ 1.5
CLOCK-211ENST00000513440 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
CLOCK-211ENST00000513440 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
CLOCK-211ENST00000513440 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
CLOCK-211ENST00000513440 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
CLOCK-211ENST00000513440 ABCC9O60706 1549 aa23.25■■□□□ 1.31
CLOCK-211ENST00000513440 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
CLOCK-211ENST00000513440 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
CLOCK-211ENST00000513440 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
CLOCK-211ENST00000513440 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
CLOCK-211ENST00000513440 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
CLOCK-211ENST00000513440 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
CLOCK-211ENST00000513440 HRCP23327 699 aa22.84■■□□□ 1.25
CLOCK-211ENST00000513440 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
CLOCK-211ENST00000513440 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
CLOCK-211ENST00000513440 NACADO15069 1562 aa22.74■■□□□ 1.23
CLOCK-211ENST00000513440 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
CLOCK-211ENST00000513440 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
CLOCK-211ENST00000513440 WIZO95785 1651 aa22.51■■□□□ 1.19
CLOCK-211ENST00000513440 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
CLOCK-211ENST00000513440 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
CLOCK-211ENST00000513440 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
CLOCK-211ENST00000513440 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.14
CLOCK-211ENST00000513440 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
CLOCK-211ENST00000513440 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
CLOCK-211ENST00000513440 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
CLOCK-211ENST00000513440 UNC13AQ9UPW8 1703 aa22.04■■□□□ 1.12
CLOCK-211ENST00000513440 TOP2AP11388 1531 aaKnown RBP22.04■■□□□ 1.12
CLOCK-211ENST00000513440 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
CLOCK-211ENST00000513440 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
CLOCK-211ENST00000513440 SOGA1O94964 1423 aa21.91■■□□□ 1.1
CLOCK-211ENST00000513440 UBTFP17480 764 aaKnown RBP21.89■■□□□ 1.09
CLOCK-211ENST00000513440 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
CLOCK-211ENST00000513440 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
CLOCK-211ENST00000513440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.09
CLOCK-211ENST00000513440 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
CLOCK-211ENST00000513440 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
CLOCK-211ENST00000513440 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
CLOCK-211ENST00000513440 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
CLOCK-211ENST00000513440 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
CLOCK-211ENST00000513440 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
CLOCK-211ENST00000513440 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
CLOCK-211ENST00000513440 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
CLOCK-211ENST00000513440 TNIKQ9UKE5 1360 aa21.59■■□□□ 1.05
CLOCK-211ENST00000513440 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
CLOCK-211ENST00000513440 EEA1Q15075 1411 aa21.5■■□□□ 1.03
CLOCK-211ENST00000513440 GOLGA3Q08378 1498 aa21.49■■□□□ 1.03
CLOCK-211ENST00000513440 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
CLOCK-211ENST00000513440 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
CLOCK-211ENST00000513440 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
CLOCK-211ENST00000513440 CLIP1P30622 1438 aa21.34■■□□□ 1.01
CLOCK-211ENST00000513440 APLP2Q06481 763 aa21.34■■□□□ 1.01
CLOCK-211ENST00000513440 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
CLOCK-211ENST00000513440 KIF21BO75037 1637 aa21.19■□□□□ 0.98
CLOCK-211ENST00000513440 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
CLOCK-211ENST00000513440 VPS8Q8N3P4 1428 aa21.15■□□□□ 0.98
CLOCK-211ENST00000513440 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
CLOCK-211ENST00000513440 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
CLOCK-211ENST00000513440 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
CLOCK-211ENST00000513440 CUX1P39880 1505 aa21.06■□□□□ 0.96
CLOCK-211ENST00000513440 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
CLOCK-211ENST00000513440 KANK4Q5T7N3 995 aaPredicted RBP21.02■□□□□ 0.96
CLOCK-211ENST00000513440 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
CLOCK-211ENST00000513440 ITGAEP38570 1179 aa20.98■□□□□ 0.95
CLOCK-211ENST00000513440 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
CLOCK-211ENST00000513440 ZNF316A6NFI3 1004 aaPredicted RBP20.96■□□□□ 0.95
CLOCK-211ENST00000513440 CFTRP13569 1480 aa20.96■□□□□ 0.95
CLOCK-211ENST00000513440 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
CLOCK-211ENST00000513440 NEUROD1Q13562 356 aa20.94■□□□□ 0.94
CLOCK-211ENST00000513440 YTHDC1Q96MU7 727 aaKnown RBP20.92■□□□□ 0.94
CLOCK-211ENST00000513440 ARAP1Q96P48 1450 aa20.92■□□□□ 0.94
CLOCK-211ENST00000513440 CUX2O14529 1486 aa20.9■□□□□ 0.94
CLOCK-211ENST00000513440 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
CLOCK-211ENST00000513440 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
CLOCK-211ENST00000513440 ACIN1Q9UKV3 1341 aaKnown RBP20.86■□□□□ 0.93
CLOCK-211ENST00000513440 ERICH3Q5RHP9 1530 aa20.85■□□□□ 0.93
CLOCK-211ENST00000513440 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
CLOCK-211ENST00000513440 IGF1RP08069 1367 aa20.79■□□□□ 0.92
CLOCK-211ENST00000513440 CENPBP07199 599 aaPredicted RBP20.78■□□□□ 0.92
CLOCK-211ENST00000513440 ARHGAP35Q9NRY4 1499 aa20.76■□□□□ 0.91
CLOCK-211ENST00000513440 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
CLOCK-211ENST00000513440 MIER1Q8N108 512 aa20.75■□□□□ 0.91
CLOCK-211ENST00000513440 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
CLOCK-211ENST00000513440 GTF3C3Q9Y5Q9 886 aa20.74■□□□□ 0.91
CLOCK-211ENST00000513440 CC2D2AQ9P2K1 1620 aa20.72■□□□□ 0.91
CLOCK-211ENST00000513440 DHX57Q6P158 1386 aaKnown RBP20.67■□□□□ 0.9
CLOCK-211ENST00000513440 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
CLOCK-211ENST00000513440 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
CLOCK-211ENST00000513440 NESP48681 1621 aa20.66■□□□□ 0.9
CLOCK-211ENST00000513440 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
CLOCK-211ENST00000513440 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
CLOCK-211ENST00000513440 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
CLOCK-211ENST00000513440 RRBP1Q9P2E9 1410 aaKnown RBP20.57■□□□□ 0.88
CLOCK-211ENST00000513440 FHOD3Q2V2M9 1422 aa20.54■□□□□ 0.88
CLOCK-211ENST00000513440 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms