RNA–Protein interactions for RNA: ENST00000509151.5

CLOCK-208, Transcript of clock circadian regulator, humanhuman

TSL 4

Gene CLOCK, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-208ENST00000509151 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
CLOCK-208ENST00000509151 CCDC180Q9P1Z9 1646 aa35.05■■■■□ 3.2
CLOCK-208ENST00000509151 ABCC9O60706 1549 aa34.85■■■■□ 3.17
CLOCK-208ENST00000509151 RB1CC1Q8TDY2 1594 aa33.22■■■□□ 2.91
CLOCK-208ENST00000509151 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
CLOCK-208ENST00000509151 NACADO15069 1562 aa33.06■■■□□ 2.88
CLOCK-208ENST00000509151 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
CLOCK-208ENST00000509151 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
CLOCK-208ENST00000509151 UNC13AQ9UPW8 1703 aa32.54■■■□□ 2.8
CLOCK-208ENST00000509151 PABPN1Q86U42 306 aaKnown RBP eCLIP32.53■■■□□ 2.8
CLOCK-208ENST00000509151 DNAJC5BQ9UF47 199 aa32.46■■■□□ 2.79
CLOCK-208ENST00000509151 DCAF1Q9Y4B6 1507 aa32.4■■■□□ 2.78
CLOCK-208ENST00000509151 BICRAQ9NZM4 1560 aa32.31■■■□□ 2.76
CLOCK-208ENST00000509151 SCRIBQ14160 1630 aa32.04■■■□□ 2.72
CLOCK-208ENST00000509151 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
CLOCK-208ENST00000509151 EIF4G1Q04637 1599 aaKnown RBP31.47■■■□□ 2.63
CLOCK-208ENST00000509151 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
CLOCK-208ENST00000509151 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
CLOCK-208ENST00000509151 SMARCA4P51532 1647 aa30.57■■■□□ 2.48
CLOCK-208ENST00000509151 NCAPD3P42695 1498 aa30.54■■■□□ 2.48
CLOCK-208ENST00000509151 ATAD2BQ9ULI0 1458 aa30.52■■■□□ 2.48
CLOCK-208ENST00000509151 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
CLOCK-208ENST00000509151 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
CLOCK-208ENST00000509151 HMGXB3Q12766 1538 aa30.33■■■□□ 2.45
CLOCK-208ENST00000509151 MROH2BQ7Z745 1585 aa30.31■■■□□ 2.44
CLOCK-208ENST00000509151 BAZ1BQ9UIG0 1483 aaKnown RBP30.24■■■□□ 2.43
CLOCK-208ENST00000509151 PEG3Q9GZU2 1588 aa30.24■■■□□ 2.43
CLOCK-208ENST00000509151 NESP48681 1621 aa30.05■■■□□ 2.4
CLOCK-208ENST00000509151 ERCC6Q03468 1493 aa30.02■■■□□ 2.4
CLOCK-208ENST00000509151 WIZO95785 1651 aa29.96■■■□□ 2.39
CLOCK-208ENST00000509151 CUX2O14529 1486 aa29.82■■■□□ 2.36
CLOCK-208ENST00000509151 LAMC3Q9Y6N6 1575 aa29.79■■■□□ 2.36
CLOCK-208ENST00000509151 RSF1Q96T23 1441 aaPredicted RBP29.78■■■□□ 2.36
CLOCK-208ENST00000509151 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.34
CLOCK-208ENST00000509151 THOC2Q8NI27 1593 aaKnown RBP29.63■■■□□ 2.33
CLOCK-208ENST00000509151 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
CLOCK-208ENST00000509151 PDS5BQ9NTI5 1447 aa29.61■■■□□ 2.33
CLOCK-208ENST00000509151 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
CLOCK-208ENST00000509151 DNAJC5Q9H3Z4 198 aa29.49■■■□□ 2.31
CLOCK-208ENST00000509151 CFTRP13569 1480 aa29.37■■■□□ 2.29
CLOCK-208ENST00000509151 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
CLOCK-208ENST00000509151 FANCD2Q9BXW9 1451 aa29.32■■■□□ 2.28
CLOCK-208ENST00000509151 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
CLOCK-208ENST00000509151 WDR62O43379 1518 aa29.28■■■□□ 2.28
CLOCK-208ENST00000509151 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
CLOCK-208ENST00000509151 URB2Q14146 1524 aaKnown RBP29.09■■■□□ 2.25
CLOCK-208ENST00000509151 PRDM2Q13029 1718 aa29.07■■■□□ 2.24
CLOCK-208ENST00000509151 TOPBP1Q92547 1522 aa28.81■■■□□ 2.2
CLOCK-208ENST00000509151 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
CLOCK-208ENST00000509151 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
CLOCK-208ENST00000509151 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
CLOCK-208ENST00000509151 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
CLOCK-208ENST00000509151 ABCC8Q09428 1581 aa28.69■■■□□ 2.18
CLOCK-208ENST00000509151 OSCARQ8IYS5 282 aa28.54■■■□□ 2.16
CLOCK-208ENST00000509151 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
CLOCK-208ENST00000509151 TARBP1Q13395 1621 aaKnown RBP28.53■■■□□ 2.16
CLOCK-208ENST00000509151 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
CLOCK-208ENST00000509151 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.15
CLOCK-208ENST00000509151 RAD54L2Q9Y4B4 1467 aa28.46■■■□□ 2.15
CLOCK-208ENST00000509151 CUX1P39880 1505 aa28.45■■■□□ 2.15
CLOCK-208ENST00000509151 FGD5Q6ZNL6 1462 aa28.41■■■□□ 2.14
CLOCK-208ENST00000509151 SOGA1O94964 1423 aa28.4■■■□□ 2.14
CLOCK-208ENST00000509151 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
CLOCK-208ENST00000509151 TDRD9Q8NDG6 1382 aaKnown RBP28.35■■■□□ 2.13
CLOCK-208ENST00000509151 CHD1O14646 1710 aa28.25■■■□□ 2.11
CLOCK-208ENST00000509151 FBLN2P98095 1184 aa28.21■■■□□ 2.11
CLOCK-208ENST00000509151 WDR97A6NE52 1622 aa28.18■■■□□ 2.1
CLOCK-208ENST00000509151 SNAPC4Q5SXM2 1469 aa28.17■■■□□ 2.1
CLOCK-208ENST00000509151 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
CLOCK-208ENST00000509151 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
CLOCK-208ENST00000509151 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
CLOCK-208ENST00000509151 GRIN2BQ13224 1484 aa28.1■■■□□ 2.09
CLOCK-208ENST00000509151 ARHGEF11O15085 1522 aa28.1■■■□□ 2.09
CLOCK-208ENST00000509151 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.08
CLOCK-208ENST00000509151 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
CLOCK-208ENST00000509151 GAPVD1Q14C86 1478 aa28.07■■■□□ 2.08
CLOCK-208ENST00000509151 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
CLOCK-208ENST00000509151 SYNJ1O43426 1573 aa28.06■■■□□ 2.08
CLOCK-208ENST00000509151 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
CLOCK-208ENST00000509151 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
CLOCK-208ENST00000509151 PBRM1Q86U86 1689 aa28.03■■■□□ 2.08
CLOCK-208ENST00000509151 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
CLOCK-208ENST00000509151 ABCA5Q8WWZ7 1642 aa28.02■■■□□ 2.08
CLOCK-208ENST00000509151 SYNJ2O15056 1496 aa27.97■■■□□ 2.07
CLOCK-208ENST00000509151 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
CLOCK-208ENST00000509151 CYB5RLQ6IPT4 315 aa27.9■■■□□ 2.06
CLOCK-208ENST00000509151 ARAP1Q96P48 1450 aa27.87■■■□□ 2.05
CLOCK-208ENST00000509151 ADAMTS12P58397 1594 aa27.79■■■□□ 2.04
CLOCK-208ENST00000509151 GRIN2AQ12879 1464 aa27.76■■■□□ 2.03
CLOCK-208ENST00000509151 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
CLOCK-208ENST00000509151 ERICH3Q5RHP9 1530 aa27.71■■■□□ 2.03
CLOCK-208ENST00000509151 CEP170Q5SW79 1584 aa27.67■■■□□ 2.02
CLOCK-208ENST00000509151 NUP160Q12769 1436 aa27.65■■■□□ 2.02
CLOCK-208ENST00000509151 ERCC6L2Q5T890 1561 aa27.57■■■□□ 2
CLOCK-208ENST00000509151 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
CLOCK-208ENST00000509151 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
CLOCK-208ENST00000509151 IGF1RP08069 1367 aa27.48■■□□□ 1.99
CLOCK-208ENST00000509151 TRHP20396 242 aaPredicted RBP27.47■■□□□ 1.99
CLOCK-208ENST00000509151 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.98
CLOCK-208ENST00000509151 JPH4Q96JJ6 628 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms