RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 NISCHQ9Y2I1 1504 aa22.86■■□□□ 1.25
GABRE-203ENST00000441219 ABCC9O60706 1549 aa21.5■■□□□ 1.03
GABRE-203ENST00000441219 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
GABRE-203ENST00000441219 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
GABRE-203ENST00000441219 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
GABRE-203ENST00000441219 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
GABRE-203ENST00000441219 NACADO15069 1562 aa19.75■□□□□ 0.75
GABRE-203ENST00000441219 DCAF8L2P0C7V8 631 aa19.74■□□□□ 0.75
GABRE-203ENST00000441219 DNAJC5Q9H3Z4 198 aa19.52■□□□□ 0.72
GABRE-203ENST00000441219 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
GABRE-203ENST00000441219 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
GABRE-203ENST00000441219 CECR2Q9BXF3 1484 aa19.42■□□□□ 0.7
GABRE-203ENST00000441219 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
GABRE-203ENST00000441219 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
GABRE-203ENST00000441219 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
GABRE-203ENST00000441219 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
GABRE-203ENST00000441219 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
GABRE-203ENST00000441219 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
GABRE-203ENST00000441219 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
GABRE-203ENST00000441219 CUX2O14529 1486 aa18.72■□□□□ 0.59
GABRE-203ENST00000441219 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
GABRE-203ENST00000441219 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
GABRE-203ENST00000441219 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
GABRE-203ENST00000441219 NESP48681 1621 aa18.26■□□□□ 0.51
GABRE-203ENST00000441219 ATAD2BQ9ULI0 1458 aa18.18■□□□□ 0.5
GABRE-203ENST00000441219 THOC2Q8NI27 1593 aaKnown RBP18.11■□□□□ 0.49
GABRE-203ENST00000441219 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
GABRE-203ENST00000441219 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
GABRE-203ENST00000441219 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
GABRE-203ENST00000441219 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
GABRE-203ENST00000441219 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
GABRE-203ENST00000441219 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
GABRE-203ENST00000441219 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
GABRE-203ENST00000441219 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
GABRE-203ENST00000441219 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
GABRE-203ENST00000441219 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
GABRE-203ENST00000441219 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
GABRE-203ENST00000441219 WDR62O43379 1518 aa17.75■□□□□ 0.43
GABRE-203ENST00000441219 PEG3Q9GZU2 1588 aa17.73■□□□□ 0.43
GABRE-203ENST00000441219 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
GABRE-203ENST00000441219 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
GABRE-203ENST00000441219 RIMBP3CA6NJZ7 1639 aa17.57■□□□□ 0.4
GABRE-203ENST00000441219 RIMBP3BA6NNM3 1639 aa17.57■□□□□ 0.4
GABRE-203ENST00000441219 RIMBP3Q9UFD9 1639 aa17.57■□□□□ 0.4
GABRE-203ENST00000441219 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
GABRE-203ENST00000441219 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
GABRE-203ENST00000441219 ARHGEF11O15085 1522 aa17.51■□□□□ 0.39
GABRE-203ENST00000441219 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
GABRE-203ENST00000441219 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
GABRE-203ENST00000441219 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
GABRE-203ENST00000441219 CFTRP13569 1480 aa17.38■□□□□ 0.37
GABRE-203ENST00000441219 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
GABRE-203ENST00000441219 WIZO95785 1651 aa17.32■□□□□ 0.36
GABRE-203ENST00000441219 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
GABRE-203ENST00000441219 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
GABRE-203ENST00000441219 FBLN2P98095 1184 aa17.21■□□□□ 0.35
GABRE-203ENST00000441219 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
GABRE-203ENST00000441219 EIF4G3O43432 1585 aaKnown RBP17.14■□□□□ 0.33
GABRE-203ENST00000441219 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.331e-10■■■□□ 18.8
GABRE-203ENST00000441219 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
GABRE-203ENST00000441219 TOP2AP11388 1531 aaKnown RBP17.09■□□□□ 0.33
GABRE-203ENST00000441219 CHD1O14646 1710 aa17.06■□□□□ 0.32
GABRE-203ENST00000441219 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
GABRE-203ENST00000441219 DNMBPQ6XZF7 1577 aa16.96■□□□□ 0.31
GABRE-203ENST00000441219 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
GABRE-203ENST00000441219 TARBP1Q13395 1621 aaKnown RBP16.95■□□□□ 0.3
GABRE-203ENST00000441219 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
GABRE-203ENST00000441219 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
GABRE-203ENST00000441219 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
GABRE-203ENST00000441219 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
GABRE-203ENST00000441219 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
GABRE-203ENST00000441219 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
GABRE-203ENST00000441219 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
GABRE-203ENST00000441219 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
GABRE-203ENST00000441219 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
GABRE-203ENST00000441219 SOGA1O94964 1423 aa16.86■□□□□ 0.29
GABRE-203ENST00000441219 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
GABRE-203ENST00000441219 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
GABRE-203ENST00000441219 SYNJ2O15056 1496 aa16.77■□□□□ 0.27
GABRE-203ENST00000441219 GRIN2BQ13224 1484 aa16.77■□□□□ 0.27
GABRE-203ENST00000441219 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
GABRE-203ENST00000441219 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
GABRE-203ENST00000441219 ERCC6L2Q5T890 1561 aa16.67■□□□□ 0.26
GABRE-203ENST00000441219 KDM4FA0A1W2PPD8 638 aa16.64■□□□□ 0.25
GABRE-203ENST00000441219 CUX1P39880 1505 aa16.59■□□□□ 0.25
GABRE-203ENST00000441219 FAM69CQ0P6D2 419 aa16.58■□□□□ 0.24
GABRE-203ENST00000441219 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
GABRE-203ENST00000441219 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
GABRE-203ENST00000441219 NUP160Q12769 1436 aa16.5■□□□□ 0.23
GABRE-203ENST00000441219 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
GABRE-203ENST00000441219 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
GABRE-203ENST00000441219 ABCC10Q5T3U5 1492 aa16.49■□□□□ 0.23
GABRE-203ENST00000441219 ABCA10Q8WWZ4 1543 aa16.48■□□□□ 0.23
GABRE-203ENST00000441219 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
GABRE-203ENST00000441219 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
GABRE-203ENST00000441219 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
GABRE-203ENST00000441219 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
GABRE-203ENST00000441219 KDM6BO15054 1643 aa16.41■□□□□ 0.22
GABRE-203ENST00000441219 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
GABRE-203ENST00000441219 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms