RNA–Protein interactions for RNA: ENST00000562929.1

COX4I1-204, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 5

Gene COX4I1, Length 452 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-204ENST00000562929 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
COX4I1-204ENST00000562929 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
COX4I1-204ENST00000562929 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
COX4I1-204ENST00000562929 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
COX4I1-204ENST00000562929 DCAF1Q9Y4B6 1507 aa23.4■■□□□ 1.34
COX4I1-204ENST00000562929 ABCC9O60706 1549 aa23.2■■□□□ 1.3
COX4I1-204ENST00000562929 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
COX4I1-204ENST00000562929 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
COX4I1-204ENST00000562929 NACADO15069 1562 aa22.94■■□□□ 1.26
COX4I1-204ENST00000562929 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
COX4I1-204ENST00000562929 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
COX4I1-204ENST00000562929 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
COX4I1-204ENST00000562929 UNC13AQ9UPW8 1703 aa22.08■■□□□ 1.12
COX4I1-204ENST00000562929 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
COX4I1-204ENST00000562929 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
COX4I1-204ENST00000562929 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
COX4I1-204ENST00000562929 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
COX4I1-204ENST00000562929 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
COX4I1-204ENST00000562929 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
COX4I1-204ENST00000562929 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
COX4I1-204ENST00000562929 WIZO95785 1651 aa21.59■■□□□ 1.05
COX4I1-204ENST00000562929 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
COX4I1-204ENST00000562929 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
COX4I1-204ENST00000562929 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
COX4I1-204ENST00000562929 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
COX4I1-204ENST00000562929 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
COX4I1-204ENST00000562929 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
COX4I1-204ENST00000562929 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
COX4I1-204ENST00000562929 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
COX4I1-204ENST00000562929 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
COX4I1-204ENST00000562929 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
COX4I1-204ENST00000562929 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
COX4I1-204ENST00000562929 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
COX4I1-204ENST00000562929 CFTRP13569 1480 aa20.72■□□□□ 0.91
COX4I1-204ENST00000562929 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
COX4I1-204ENST00000562929 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
COX4I1-204ENST00000562929 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
COX4I1-204ENST00000562929 FAM9AQ8IZU1 332 aaPredicted RBP20.62■□□□□ 0.89
COX4I1-204ENST00000562929 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
COX4I1-204ENST00000562929 EEA1Q15075 1411 aa20.5■□□□□ 0.87
COX4I1-204ENST00000562929 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
COX4I1-204ENST00000562929 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
COX4I1-204ENST00000562929 TOP2BQ02880 1626 aa20.45■□□□□ 0.87
COX4I1-204ENST00000562929 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
COX4I1-204ENST00000562929 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
COX4I1-204ENST00000562929 SOGA1O94964 1423 aa20.43■□□□□ 0.86
COX4I1-204ENST00000562929 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
COX4I1-204ENST00000562929 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
COX4I1-204ENST00000562929 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
COX4I1-204ENST00000562929 CUX1P39880 1505 aa20.37■□□□□ 0.85
COX4I1-204ENST00000562929 NESP48681 1621 aa20.36■□□□□ 0.85
COX4I1-204ENST00000562929 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
COX4I1-204ENST00000562929 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
COX4I1-204ENST00000562929 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
COX4I1-204ENST00000562929 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
COX4I1-204ENST00000562929 KIF27Q86VH2 1401 aa20.2■□□□□ 0.82
COX4I1-204ENST00000562929 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
COX4I1-204ENST00000562929 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
COX4I1-204ENST00000562929 TNIKQ9UKE5 1360 aa20.17■□□□□ 0.82
COX4I1-204ENST00000562929 FGD5Q6ZNL6 1462 aa20.17■□□□□ 0.82
COX4I1-204ENST00000562929 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
COX4I1-204ENST00000562929 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
COX4I1-204ENST00000562929 KIF21BO75037 1637 aa20.1■□□□□ 0.81
COX4I1-204ENST00000562929 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
COX4I1-204ENST00000562929 CUX2O14529 1486 aa20.08■□□□□ 0.81
COX4I1-204ENST00000562929 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
COX4I1-204ENST00000562929 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
COX4I1-204ENST00000562929 IGF1RP08069 1367 aa20.03■□□□□ 0.8
COX4I1-204ENST00000562929 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
COX4I1-204ENST00000562929 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.8
COX4I1-204ENST00000562929 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
COX4I1-204ENST00000562929 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
COX4I1-204ENST00000562929 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
COX4I1-204ENST00000562929 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
COX4I1-204ENST00000562929 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
COX4I1-204ENST00000562929 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
COX4I1-204ENST00000562929 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
COX4I1-204ENST00000562929 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
COX4I1-204ENST00000562929 WDR62O43379 1518 aa19.85■□□□□ 0.77
COX4I1-204ENST00000562929 CLIP1P30622 1438 aa19.85■□□□□ 0.77
COX4I1-204ENST00000562929 GAPVD1Q14C86 1478 aa19.83■□□□□ 0.76
COX4I1-204ENST00000562929 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
COX4I1-204ENST00000562929 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
COX4I1-204ENST00000562929 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
COX4I1-204ENST00000562929 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
COX4I1-204ENST00000562929 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
COX4I1-204ENST00000562929 CUL7Q14999 1698 aa19.76■□□□□ 0.75
COX4I1-204ENST00000562929 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
COX4I1-204ENST00000562929 RANGAP1P46060 587 aaPredicted RBP19.74■□□□□ 0.75
COX4I1-204ENST00000562929 THOC2Q8NI27 1593 aaKnown RBP19.71■□□□□ 0.75
COX4I1-204ENST00000562929 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.746e-9■■■■■ 43.9
COX4I1-204ENST00000562929 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
COX4I1-204ENST00000562929 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
COX4I1-204ENST00000562929 APLP2Q06481 763 aa19.65■□□□□ 0.74
COX4I1-204ENST00000562929 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
COX4I1-204ENST00000562929 ZNF608Q9ULD9 1512 aaPredicted RBP19.61■□□□□ 0.73
COX4I1-204ENST00000562929 PPARGC1BQ86YN6 1023 aaKnown RBP19.6■□□□□ 0.73
COX4I1-204ENST00000562929 ARHGAP35Q9NRY4 1499 aa19.58■□□□□ 0.72
COX4I1-204ENST00000562929 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
COX4I1-204ENST00000562929 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms