RNA–Protein interactions for RNA: ENST00000564544.1

COX4I1-206, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 3

Gene COX4I1, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-206ENST00000564544 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.06
COX4I1-206ENST00000564544 ABCC9O60706 1549 aa30.98■■■□□ 2.55
COX4I1-206ENST00000564544 CCDC180Q9P1Z9 1646 aa30.77■■■□□ 2.52
COX4I1-206ENST00000564544 RB1CC1Q8TDY2 1594 aa29.45■■■□□ 2.31
COX4I1-206ENST00000564544 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
COX4I1-206ENST00000564544 NACADO15069 1562 aa29.2■■■□□ 2.26
COX4I1-206ENST00000564544 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
COX4I1-206ENST00000564544 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
COX4I1-206ENST00000564544 MYO15BQ96JP2 1530 aa28.77■■■□□ 2.2
COX4I1-206ENST00000564544 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
COX4I1-206ENST00000564544 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
COX4I1-206ENST00000564544 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
COX4I1-206ENST00000564544 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
COX4I1-206ENST00000564544 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
COX4I1-206ENST00000564544 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
COX4I1-206ENST00000564544 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
COX4I1-206ENST00000564544 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
COX4I1-206ENST00000564544 EIF4G1Q04637 1599 aaKnown RBP27.87■■■□□ 2.05
COX4I1-206ENST00000564544 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
COX4I1-206ENST00000564544 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
COX4I1-206ENST00000564544 CUX2O14529 1486 aa26.89■■□□□ 1.9
COX4I1-206ENST00000564544 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
COX4I1-206ENST00000564544 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
COX4I1-206ENST00000564544 SMARCA2P51531 1590 aa26.77■■□□□ 1.88
COX4I1-206ENST00000564544 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
COX4I1-206ENST00000564544 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
COX4I1-206ENST00000564544 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
COX4I1-206ENST00000564544 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
COX4I1-206ENST00000564544 NESP48681 1621 aa26.51■■□□□ 1.83
COX4I1-206ENST00000564544 PEG3Q9GZU2 1588 aa26.47■■□□□ 1.83
COX4I1-206ENST00000564544 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
COX4I1-206ENST00000564544 MROH2BQ7Z745 1585 aa26.3■■□□□ 1.8
COX4I1-206ENST00000564544 THOC2Q8NI27 1593 aaKnown RBP26.3■■□□□ 1.8
COX4I1-206ENST00000564544 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
COX4I1-206ENST00000564544 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
COX4I1-206ENST00000564544 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
COX4I1-206ENST00000564544 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
COX4I1-206ENST00000564544 WDR62O43379 1518 aa25.94■■□□□ 1.74
COX4I1-206ENST00000564544 WIZO95785 1651 aa25.93■■□□□ 1.74
COX4I1-206ENST00000564544 CEP164Q9UPV0 1460 aa25.88■■□□□ 1.73
COX4I1-206ENST00000564544 FANCD2Q9BXW9 1451 aa25.82■■□□□ 1.72
COX4I1-206ENST00000564544 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
COX4I1-206ENST00000564544 CFTRP13569 1480 aa25.78■■□□□ 1.72
COX4I1-206ENST00000564544 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
COX4I1-206ENST00000564544 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
COX4I1-206ENST00000564544 OSCARQ8IYS5 282 aa25.65■■□□□ 1.7
COX4I1-206ENST00000564544 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
COX4I1-206ENST00000564544 IFT140Q96RY7 1462 aa25.4■■□□□ 1.66
COX4I1-206ENST00000564544 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
COX4I1-206ENST00000564544 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
COX4I1-206ENST00000564544 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
COX4I1-206ENST00000564544 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
COX4I1-206ENST00000564544 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
COX4I1-206ENST00000564544 RIMBP3CA6NJZ7 1639 aa25.21■■□□□ 1.63
COX4I1-206ENST00000564544 RIMBP3BA6NNM3 1639 aa25.21■■□□□ 1.63
COX4I1-206ENST00000564544 RIMBP3Q9UFD9 1639 aa25.21■■□□□ 1.63
COX4I1-206ENST00000564544 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
COX4I1-206ENST00000564544 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
COX4I1-206ENST00000564544 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
COX4I1-206ENST00000564544 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.66e-9■■■■■ 43.9
COX4I1-206ENST00000564544 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
COX4I1-206ENST00000564544 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
COX4I1-206ENST00000564544 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
COX4I1-206ENST00000564544 FBLN2P98095 1184 aa24.99■■□□□ 1.59
COX4I1-206ENST00000564544 CHD1O14646 1710 aa24.94■■□□□ 1.58
COX4I1-206ENST00000564544 SOGA1O94964 1423 aa24.94■■□□□ 1.58
COX4I1-206ENST00000564544 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
COX4I1-206ENST00000564544 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
COX4I1-206ENST00000564544 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
COX4I1-206ENST00000564544 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
COX4I1-206ENST00000564544 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
COX4I1-206ENST00000564544 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
COX4I1-206ENST00000564544 CHMP7Q8WUX9 453 aaPredicted RBP24.8■■□□□ 1.56
COX4I1-206ENST00000564544 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
COX4I1-206ENST00000564544 MAGI1Q96QZ7 1491 aaPredicted RBP24.78■■□□□ 1.56
COX4I1-206ENST00000564544 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
COX4I1-206ENST00000564544 SYNJ1O43426 1573 aa24.73■■□□□ 1.55
COX4I1-206ENST00000564544 CUX1P39880 1505 aa24.73■■□□□ 1.55
COX4I1-206ENST00000564544 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
COX4I1-206ENST00000564544 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
COX4I1-206ENST00000564544 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
COX4I1-206ENST00000564544 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
COX4I1-206ENST00000564544 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
COX4I1-206ENST00000564544 ABCA5Q8WWZ7 1642 aa24.47■■□□□ 1.51
COX4I1-206ENST00000564544 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.511e-6■□□□□ 10.2
COX4I1-206ENST00000564544 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
COX4I1-206ENST00000564544 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
COX4I1-206ENST00000564544 NUP160Q12769 1436 aa24.35■■□□□ 1.49
COX4I1-206ENST00000564544 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
COX4I1-206ENST00000564544 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
COX4I1-206ENST00000564544 FHAD1B1AJZ9 1412 aa24.32■■□□□ 1.48
COX4I1-206ENST00000564544 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
COX4I1-206ENST00000564544 CEP170Q5SW79 1584 aa24.28■■□□□ 1.48
COX4I1-206ENST00000564544 BIVM-ERCC5R4GMW8 1640 aa24.27■■□□□ 1.48
COX4I1-206ENST00000564544 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
COX4I1-206ENST00000564544 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
COX4I1-206ENST00000564544 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
COX4I1-206ENST00000564544 PRG4Q92954 1404 aaPredicted RBP24.13■■□□□ 1.45
COX4I1-206ENST00000564544 JPH4Q96JJ6 628 aa24.12■■□□□ 1.45
COX4I1-206ENST00000564544 NPM1P06748 294 aaKnown RBP eCLIP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms