Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC40.69■■■■■ 4.1not detected
DDX52Q9Y2R4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98not detected
DDX52Q9Y2R4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC39.46■■■■□ 3.91not detected
DDX52Q9Y2R4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91not detected
DDX52Q9Y2R4 AL356512.1-201ENST00000607453 1739 ntBASIC39.43■■■■□ 3.9not detected
DDX52Q9Y2R4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89not detected
DDX52Q9Y2R4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC39.29■■■■□ 3.88not detected
DDX52Q9Y2R4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC38.67■■■■□ 3.78not detected
DDX52Q9Y2R4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC38.55■■■■□ 3.76not detected
DDX52Q9Y2R4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC38.38■■■■□ 3.73not detected
DDX52Q9Y2R4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC38.37■■■■□ 3.73not detected
DDX52Q9Y2R4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC38.01■■■■□ 3.67not detected
DDX52Q9Y2R4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC37.97■■■■□ 3.67not detected
DDX52Q9Y2R4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC37.85■■■■□ 3.65not detected
DDX52Q9Y2R4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC37.81■■■■□ 3.64not detected
DDX52Q9Y2R4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64not detected
DDX52Q9Y2R4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC37.73■■■■□ 3.63not detected
DDX52Q9Y2R4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC37.64■■■■□ 3.62not detected
DDX52Q9Y2R4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC37.55■■■■□ 3.6not detected
DDX52Q9Y2R4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC37.41■■■■□ 3.58not detected
DDX52Q9Y2R4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC37.33■■■■□ 3.57not detected
DDX52Q9Y2R4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC36.95■■■■□ 3.5not detected
DDX52Q9Y2R4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48not detected
DDX52Q9Y2R4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47not detected
DDX52Q9Y2R4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC36.7■■■■□ 3.47not detected
DDX52Q9Y2R4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36.69■■■■□ 3.46not detected
DDX52Q9Y2R4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC36.69■■■■□ 3.46not detected
DDX52Q9Y2R4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC36.61■■■■□ 3.45not detected
DDX52Q9Y2R4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43not detected
DDX52Q9Y2R4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC36.5■■■■□ 3.43not detected
DDX52Q9Y2R4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42not detected
DDX52Q9Y2R4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC36.4■■■■□ 3.42not detected
DDX52Q9Y2R4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC36.32■■■■□ 3.4not detected
DDX52Q9Y2R4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC36.32■■■■□ 3.4not detected
DDX52Q9Y2R4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC36.32■■■■□ 3.42e-6■■■□□ 14.9
DDX52Q9Y2R4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC36.29■■■■□ 3.4not detected
DDX52Q9Y2R4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39not detected
DDX52Q9Y2R4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC36.04■■■■□ 3.36not detected
DDX52Q9Y2R4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC36.01■■■■□ 3.36not detected
DDX52Q9Y2R4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35not detected
DDX52Q9Y2R4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC35.99■■■■□ 3.35not detected
DDX52Q9Y2R4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.99■■■■□ 3.35not detected
DDX52Q9Y2R4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC35.99■■■■□ 3.35not detected
DDX52Q9Y2R4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC35.94■■■■□ 3.34not detected
DDX52Q9Y2R4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34not detected
DDX52Q9Y2R4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33not detected
DDX52Q9Y2R4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC35.87■■■■□ 3.33not detected
DDX52Q9Y2R4 AC015813.7-201ENST00000623294 581 ntBASIC35.86■■■■□ 3.33not detected
DDX52Q9Y2R4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC35.57■■■■□ 3.28not detected
DDX52Q9Y2R4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.282e-6■■■■□ 20.5
DDX52Q9Y2R4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC35.55■■■■□ 3.28not detected
DDX52Q9Y2R4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28not detected
DDX52Q9Y2R4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28not detected
DDX52Q9Y2R4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC35.5■■■■□ 3.274e-7■■■■■ 41
DDX52Q9Y2R4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC35.49■■■■□ 3.27not detected
DDX52Q9Y2R4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC35.46■■■■□ 3.27not detected
DDX52Q9Y2R4 AC006077.2-201ENST00000623591 457 ntBASIC35.4■■■■□ 3.26not detected
DDX52Q9Y2R4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC35.39■■■■□ 3.26not detected
DDX52Q9Y2R4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24not detected
DDX52Q9Y2R4 ZNRF2P1-201ENST00000441407 443 ntBASIC35.27■■■■□ 3.24not detected
DDX52Q9Y2R4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC35.25■■■■□ 3.23not detected
DDX52Q9Y2R4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC35.18■■■■□ 3.22not detected
DDX52Q9Y2R4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC35.15■■■■□ 3.22not detected
DDX52Q9Y2R4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2not detected
DDX52Q9Y2R4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2not detected
DDX52Q9Y2R4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC35.01■■■■□ 3.2not detected
DDX52Q9Y2R4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC35.01■■■■□ 3.19not detected
DDX52Q9Y2R4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC34.96■■■■□ 3.19not detected
DDX52Q9Y2R4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18not detected
DDX52Q9Y2R4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17not detected
DDX52Q9Y2R4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17not detected
DDX52Q9Y2R4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17not detected
DDX52Q9Y2R4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC34.82■■■■□ 3.16not detected
DDX52Q9Y2R4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16not detected
DDX52Q9Y2R4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15not detected
DDX52Q9Y2R4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC34.73■■■■□ 3.15not detected
DDX52Q9Y2R4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.151e-6■■■□□ 17.5
DDX52Q9Y2R4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC34.67■■■■□ 3.14not detected
DDX52Q9Y2R4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.133e-7■■■■■ 27.1
DDX52Q9Y2R4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC34.6■■■■□ 3.13not detected
DDX52Q9Y2R4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13not detected
DDX52Q9Y2R4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC34.58■■■■□ 3.13not detected
DDX52Q9Y2R4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC34.57■■■■□ 3.12not detected
DDX52Q9Y2R4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC34.56■■■■□ 3.12not detected
DDX52Q9Y2R4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12not detected
DDX52Q9Y2R4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC34.54■■■■□ 3.12not detected
DDX52Q9Y2R4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC34.52■■■■□ 3.12not detected
DDX52Q9Y2R4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC34.47■■■■□ 3.112e-17■□□□□ 10.4
DDX52Q9Y2R4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11not detected
DDX52Q9Y2R4 AP002365.1-201ENST00000603448 772 ntBASIC34.43■■■■□ 3.1not detected
DDX52Q9Y2R4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC34.41■■■■□ 3.1not detected
DDX52Q9Y2R4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1not detected
DDX52Q9Y2R4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC34.36■■■■□ 3.09not detected
DDX52Q9Y2R4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC34.34■■■■□ 3.09not detected
DDX52Q9Y2R4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC34.32■■■■□ 3.08not detected
DDX52Q9Y2R4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08not detected
DDX52Q9Y2R4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.28■■■■□ 3.08not detected
DDX52Q9Y2R4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC34.27■■■■□ 3.08not detected
DDX52Q9Y2R4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC34.27■■■■□ 3.08not detected
DDX52Q9Y2R4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07not detected
Retrieved 100 of 98,524 protein–RNA pairs in 249.2 ms