RNA–Protein interactions for RNA: ENST00000566617.1

COX4I1-212, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 4

Gene COX4I1, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-212ENST00000566617 NISCHQ9Y2I1 1504 aa68.8■■■■■ 8.6
COX4I1-212ENST00000566617 CCDC180Q9P1Z9 1646 aa61.19■■■■■ 7.39
COX4I1-212ENST00000566617 ABCC9O60706 1549 aa59.6■■■■■ 7.13
COX4I1-212ENST00000566617 NACADO15069 1562 aa57.51■■■■■ 6.8
COX4I1-212ENST00000566617 RB1CC1Q8TDY2 1594 aa57.51■■■■■ 6.8
COX4I1-212ENST00000566617 ZCCHC6Q5VYS8 1495 aaKnown RBP57.32■■■■■ 6.77
COX4I1-212ENST00000566617 MYO15BQ96JP2 1530 aa57.28■■■■■ 6.76
COX4I1-212ENST00000566617 DCAF8L2P0C7V8 631 aa57.26■■■■■ 6.76
COX4I1-212ENST00000566617 DCAF1Q9Y4B6 1507 aa57.04■■■■■ 6.72
COX4I1-212ENST00000566617 UNC13AQ9UPW8 1703 aa56.2■■■■■ 6.59
COX4I1-212ENST00000566617 BICRAQ9NZM4 1560 aa55.75■■■■■ 6.52
COX4I1-212ENST00000566617 PABPN1Q86U42 306 aaKnown RBP eCLIP55.68■■■■■ 6.5
COX4I1-212ENST00000566617 SCRIBQ14160 1630 aa55.65■■■■■ 6.5
COX4I1-212ENST00000566617 SHROOM4Q9ULL8 1493 aa55.29■■■■■ 6.44
COX4I1-212ENST00000566617 DNAJC5BQ9UF47 199 aa54.66■■■■■ 6.34
COX4I1-212ENST00000566617 EIF4G1Q04637 1599 aaKnown RBP54.25■■■■■ 6.28
COX4I1-212ENST00000566617 CC2D2AQ9P2K1 1620 aa54.01■■■■■ 6.24
COX4I1-212ENST00000566617 CECR2Q9BXF3 1484 aa53.6■■■■■ 6.17
COX4I1-212ENST00000566617 SMARCA4P51532 1647 aa53.35■■■■■ 6.13
COX4I1-212ENST00000566617 BAZ1AQ9NRL2 1556 aaPredicted RBP53.33■■■■■ 6.13
COX4I1-212ENST00000566617 NCAPD3P42695 1498 aa53.07■■■■■ 6.09
COX4I1-212ENST00000566617 ATAD2BQ9ULI0 1458 aa53.05■■■■■ 6.08
COX4I1-212ENST00000566617 SMARCA2P51531 1590 aa53.02■■■■■ 6.08
COX4I1-212ENST00000566617 MROH2BQ7Z745 1585 aa52.97■■■■■ 6.07
COX4I1-212ENST00000566617 PEG3Q9GZU2 1588 aa52.92■■■■■ 6.06
COX4I1-212ENST00000566617 HMGXB3Q12766 1538 aa52.79■■■■■ 6.04
COX4I1-212ENST00000566617 BAZ1BQ9UIG0 1483 aaKnown RBP52.57■■■■■ 6.01
COX4I1-212ENST00000566617 RSF1Q96T23 1441 aaPredicted RBP52.42■■■■■ 5.98
COX4I1-212ENST00000566617 WIZO95785 1651 aa52.39■■■■■ 5.98
COX4I1-212ENST00000566617 TOP2AP11388 1531 aaKnown RBP51.89■■■■■ 5.9
COX4I1-212ENST00000566617 LAMC3Q9Y6N6 1575 aa51.63■■■■■ 5.86
COX4I1-212ENST00000566617 NESP48681 1621 aa51.61■■■■■ 5.85
COX4I1-212ENST00000566617 CADPSQ9ULU8 1353 aa51.47■■■■■ 5.83
COX4I1-212ENST00000566617 ERCC6Q03468 1493 aa51.37■■■■■ 5.81
COX4I1-212ENST00000566617 PDS5BQ9NTI5 1447 aa51.26■■■■■ 5.8
COX4I1-212ENST00000566617 CCDC88BA6NC98 1476 aa51.26■■■■■ 5.8
COX4I1-212ENST00000566617 CFTRP13569 1480 aa51.21■■■■■ 5.79
COX4I1-212ENST00000566617 KIF21AQ7Z4S6 1674 aa51.05■■■■■ 5.76
COX4I1-212ENST00000566617 SUPT5HO00267 1087 aaKnown RBP51.01■■■■■ 5.76
COX4I1-212ENST00000566617 CUX2O14529 1486 aa50.92■■■■■ 5.74
COX4I1-212ENST00000566617 THOC2Q8NI27 1593 aaKnown RBP50.89■■■■■ 5.74
COX4I1-212ENST00000566617 PRDM2Q13029 1718 aa50.86■■■■■ 5.73
COX4I1-212ENST00000566617 FANCD2Q9BXW9 1451 aa50.84■■■■■ 5.73
COX4I1-212ENST00000566617 CEP164Q9UPV0 1460 aa50.78■■■■■ 5.72
COX4I1-212ENST00000566617 MRC2Q9UBG0 1479 aa50.69■■■■■ 5.7
COX4I1-212ENST00000566617 WDR62O43379 1518 aa50.55■■■■■ 5.68
COX4I1-212ENST00000566617 URB2Q14146 1524 aaKnown RBP50.31■■■■■ 5.65
COX4I1-212ENST00000566617 ABCC8Q09428 1581 aa50.16■■■■■ 5.62
COX4I1-212ENST00000566617 TOPBP1Q92547 1522 aa50.06■■■■■ 5.6
COX4I1-212ENST00000566617 DNMBPQ6XZF7 1577 aa50.01■■■■■ 5.6
COX4I1-212ENST00000566617 IFT140Q96RY7 1462 aa49.74■■■■■ 5.55
COX4I1-212ENST00000566617 CUX1P39880 1505 aa49.69■■■■■ 5.54
COX4I1-212ENST00000566617 POLA1P09884 1462 aaPredicted RBP49.63■■■■■ 5.53
COX4I1-212ENST00000566617 TARBP1Q13395 1621 aaKnown RBP49.53■■■■■ 5.52
COX4I1-212ENST00000566617 FGD5Q6ZNL6 1462 aa49.5■■■■■ 5.51
COX4I1-212ENST00000566617 ZNF608Q9ULD9 1512 aaPredicted RBP49.43■■■■■ 5.5
COX4I1-212ENST00000566617 SOGA1O94964 1423 aa49.43■■■■■ 5.5
COX4I1-212ENST00000566617 WRNQ14191 1432 aaPredicted RBP eCLIP49.41■■■■■ 5.5
COX4I1-212ENST00000566617 RAD54L2Q9Y4B4 1467 aa49.35■■■■■ 5.49
COX4I1-212ENST00000566617 BIVM-ERCC5R4GMW8 1640 aa49.34■■■■■ 5.49
COX4I1-212ENST00000566617 TOP2BQ02880 1626 aa49.34■■■■■ 5.49
COX4I1-212ENST00000566617 EIF4G3O43432 1585 aaKnown RBP49.27■■■■■ 5.48
COX4I1-212ENST00000566617 SYNJ1O43426 1573 aa49.25■■■■■ 5.47
COX4I1-212ENST00000566617 DNAJC5Q9H3Z4 198 aa49.25■■■■■ 5.47
COX4I1-212ENST00000566617 WDR97A6NE52 1622 aa49.23■■■■■ 5.47
COX4I1-212ENST00000566617 AQRO60306 1485 aaKnown RBP eCLIP49.17■■■■■ 5.468e-18■■■■■ 42.4
COX4I1-212ENST00000566617 TDRD9Q8NDG6 1382 aaKnown RBP49.09■■■■■ 5.45
COX4I1-212ENST00000566617 ABCA10Q8WWZ4 1543 aa49.09■■■■■ 5.45
COX4I1-212ENST00000566617 ABCA5Q8WWZ7 1642 aa48.87■■■■■ 5.41
COX4I1-212ENST00000566617 GAPVD1Q14C86 1478 aa48.86■■■■■ 5.41
COX4I1-212ENST00000566617 GRIN2BQ13224 1484 aa48.86■■■■■ 5.41
COX4I1-212ENST00000566617 OSCARQ8IYS5 282 aa48.81■■■■■ 5.4
COX4I1-212ENST00000566617 PBRM1Q86U86 1689 aa48.75■■■■■ 5.4
COX4I1-212ENST00000566617 MAGI1Q96QZ7 1491 aaPredicted RBP48.74■■■■■ 5.39
COX4I1-212ENST00000566617 SNAPC4Q5SXM2 1469 aa48.71■■■■■ 5.39
COX4I1-212ENST00000566617 CHD1O14646 1710 aa48.64■■■■■ 5.38
COX4I1-212ENST00000566617 SYNJ2O15056 1496 aa48.53■■■■■ 5.36
COX4I1-212ENST00000566617 ERICH3Q5RHP9 1530 aa48.52■■■■■ 5.36
COX4I1-212ENST00000566617 FBLN2P98095 1184 aa48.49■■■■■ 5.35
COX4I1-212ENST00000566617 CHMP7Q8WUX9 453 aaPredicted RBP48.46■■■■■ 5.35
COX4I1-212ENST00000566617 KIF27Q86VH2 1401 aa48.4■■■■■ 5.34
COX4I1-212ENST00000566617 ADAMTS12P58397 1594 aa48.36■■■■■ 5.33
COX4I1-212ENST00000566617 FHAD1B1AJZ9 1412 aa48.32■■■■■ 5.33
COX4I1-212ENST00000566617 TRIM41Q8WV44 630 aa48.27■■■■■ 5.32
COX4I1-212ENST00000566617 GRIN2AQ12879 1464 aa48.22■■■■■ 5.31
COX4I1-212ENST00000566617 IGF1RP08069 1367 aa48.2■■■■■ 5.31
COX4I1-212ENST00000566617 CLASP1Q7Z460 1538 aa48.15■■■■■ 5.3
COX4I1-212ENST00000566617 CUL7Q14999 1698 aa48.08■■■■■ 5.29
COX4I1-212ENST00000566617 NUP160Q12769 1436 aa48.04■■■■■ 5.28
COX4I1-212ENST00000566617 ARHGEF11O15085 1522 aa47.98■■■■■ 5.27
COX4I1-212ENST00000566617 RIMBP3CA6NJZ7 1639 aa47.97■■■■■ 5.27
COX4I1-212ENST00000566617 RIMBP3BA6NNM3 1639 aa47.97■■■■■ 5.27
COX4I1-212ENST00000566617 RIMBP3Q9UFD9 1639 aa47.97■■■■■ 5.27
COX4I1-212ENST00000566617 CEP170Q5SW79 1584 aa47.95■■■■■ 5.27
COX4I1-212ENST00000566617 RUSC2Q8N2Y8 1516 aa47.91■■■■■ 5.26
COX4I1-212ENST00000566617 CARMIL1Q5VZK9 1371 aa47.89■■■■■ 5.26
COX4I1-212ENST00000566617 CHIC1Q5VXU3 224 aa47.75■■■■■ 5.23
COX4I1-212ENST00000566617 SHROOM2Q13796 1616 aa47.68■■■■■ 5.22
COX4I1-212ENST00000566617 RAPGEF2Q9Y4G8 1499 aa47.63■■■■■ 5.22
COX4I1-212ENST00000566617 KIAA0586Q9BVV6 1533 aa47.61■■■■■ 5.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms