Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 SMUG1P1-201ENST00000590640 811 ntBASIC25.23■■□□□ 1.63
EFCC1Q9HA90 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
EFCC1Q9HA90 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 POU5F1P3-201ENST00000428824 1078 ntBASIC25.22■■□□□ 1.63
EFCC1Q9HA90 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 ITM2C-210ENST00000620962 501 ntBASIC25.22■■□□□ 1.63
EFCC1Q9HA90 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
EFCC1Q9HA90 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.21■■□□□ 1.63
EFCC1Q9HA90 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
EFCC1Q9HA90 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
EFCC1Q9HA90 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
EFCC1Q9HA90 KRT18P29-201ENST00000397031 1267 ntBASIC25.21■■□□□ 1.63
EFCC1Q9HA90 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.21■■□□□ 1.63
EFCC1Q9HA90 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.21■■□□□ 1.63
EFCC1Q9HA90 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.21■■□□□ 1.63
EFCC1Q9HA90 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
EFCC1Q9HA90 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
EFCC1Q9HA90 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
EFCC1Q9HA90 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
EFCC1Q9HA90 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
EFCC1Q9HA90 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 AC073210.2-201ENST00000430369 194 ntBASIC25.2■■□□□ 1.62
EFCC1Q9HA90 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
EFCC1Q9HA90 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 AC068587.7-201ENST00000641602 218 ntBASIC25.19■■□□□ 1.62
EFCC1Q9HA90 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
EFCC1Q9HA90 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 AC010141.3-201ENST00000456659 717 ntBASIC25.18■■□□□ 1.62
EFCC1Q9HA90 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
EFCC1Q9HA90 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
EFCC1Q9HA90 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
EFCC1Q9HA90 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
EFCC1Q9HA90 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.17■■□□□ 1.62
EFCC1Q9HA90 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.17■■□□□ 1.62
EFCC1Q9HA90 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
EFCC1Q9HA90 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.16■■□□□ 1.62
EFCC1Q9HA90 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
EFCC1Q9HA90 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.16■■□□□ 1.62
EFCC1Q9HA90 AL353803.4-201ENST00000565882 1934 ntBASIC25.16■■□□□ 1.62
EFCC1Q9HA90 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
EFCC1Q9HA90 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
EFCC1Q9HA90 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
EFCC1Q9HA90 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
EFCC1Q9HA90 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.15■■□□□ 1.62
EFCC1Q9HA90 AF201337.1-201ENST00000520239 748 ntBASIC25.15■■□□□ 1.62
EFCC1Q9HA90 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
EFCC1Q9HA90 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
EFCC1Q9HA90 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.14■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms