RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 NISCHQ9Y2I1 1504 aa50.25■■■■■ 5.64
KCNQ2-201ENST00000344425 ABCC9O60706 1549 aa45.28■■■■■ 4.84
KCNQ2-201ENST00000344425 CCDC180Q9P1Z9 1646 aa45.11■■■■■ 4.81
KCNQ2-201ENST00000344425 RB1CC1Q8TDY2 1594 aa43.06■■■■■ 4.48
KCNQ2-201ENST00000344425 NACADO15069 1562 aa42.74■■■■■ 4.43
KCNQ2-201ENST00000344425 DNAJC5BQ9UF47 199 aa42.59■■■■■ 4.41
KCNQ2-201ENST00000344425 DCAF8L2P0C7V8 631 aa42.57■■■■■ 4.41
KCNQ2-201ENST00000344425 PABPN1Q86U42 306 aaKnown RBP eCLIP42.17■■■■■ 4.34
KCNQ2-201ENST00000344425 MYO15BQ96JP2 1530 aa42.12■■■■■ 4.33
KCNQ2-201ENST00000344425 UNC13AQ9UPW8 1703 aa41.95■■■■■ 4.31
KCNQ2-201ENST00000344425 BICRAQ9NZM4 1560 aa41.74■■■■■ 4.27
KCNQ2-201ENST00000344425 ZCCHC6Q5VYS8 1495 aaKnown RBP41.6■■■■■ 4.25
KCNQ2-201ENST00000344425 DCAF1Q9Y4B6 1507 aa41.52■■■■■ 4.24
KCNQ2-201ENST00000344425 SHROOM4Q9ULL8 1493 aa41.27■■■■■ 4.2
KCNQ2-201ENST00000344425 SCRIBQ14160 1630 aa41.09■■■■■ 4.17
KCNQ2-201ENST00000344425 CC2D2AQ9P2K1 1620 aa40.87■■■■■ 4.13
KCNQ2-201ENST00000344425 CECR2Q9BXF3 1484 aa40.83■■■■■ 4.13
KCNQ2-201ENST00000344425 EIF4G1Q04637 1599 aaKnown RBP40.77■■■■■ 4.12
KCNQ2-201ENST00000344425 NCAPD3P42695 1498 aa39.48■■■■□ 3.91
KCNQ2-201ENST00000344425 ATAD2BQ9ULI0 1458 aa39.31■■■■□ 3.88
KCNQ2-201ENST00000344425 DNAJC5Q9H3Z4 198 aa39.29■■■■□ 3.88
KCNQ2-201ENST00000344425 SMARCA2P51531 1590 aa39.21■■■■□ 3.87
KCNQ2-201ENST00000344425 SMARCA4P51532 1647 aa39.19■■■■□ 3.86
KCNQ2-201ENST00000344425 ERCC6Q03468 1493 aa39.16■■■■□ 3.86
KCNQ2-201ENST00000344425 HMGXB3Q12766 1538 aa39.13■■■■□ 3.85
KCNQ2-201ENST00000344425 CUX2O14529 1486 aa39.12■■■■□ 3.85
KCNQ2-201ENST00000344425 BAZ1AQ9NRL2 1556 aaPredicted RBP39.03■■■■□ 3.84
KCNQ2-201ENST00000344425 BAZ1BQ9UIG0 1483 aaKnown RBP38.94■■■■□ 3.82
KCNQ2-201ENST00000344425 PEG3Q9GZU2 1588 aa38.83■■■■□ 3.81
KCNQ2-201ENST00000344425 NESP48681 1621 aa38.83■■■■□ 3.81
KCNQ2-201ENST00000344425 MROH2BQ7Z745 1585 aa38.69■■■■□ 3.78
KCNQ2-201ENST00000344425 LAMC3Q9Y6N6 1575 aa38.58■■■■□ 3.77
KCNQ2-201ENST00000344425 THOC2Q8NI27 1593 aaKnown RBP38.44■■■■□ 3.74
KCNQ2-201ENST00000344425 PDS5BQ9NTI5 1447 aa38.43■■■■□ 3.74
KCNQ2-201ENST00000344425 CADPSQ9ULU8 1353 aa38.29■■■■□ 3.72
KCNQ2-201ENST00000344425 KIF21AQ7Z4S6 1674 aa38.28■■■■□ 3.72
KCNQ2-201ENST00000344425 WIZO95785 1651 aa38.19■■■■□ 3.7
KCNQ2-201ENST00000344425 MRC2Q9UBG0 1479 aa38.05■■■■□ 3.68
KCNQ2-201ENST00000344425 WDR62O43379 1518 aa37.93■■■■□ 3.66
KCNQ2-201ENST00000344425 RSF1Q96T23 1441 aaPredicted RBP37.88■■■■□ 3.65
KCNQ2-201ENST00000344425 CEP164Q9UPV0 1460 aa37.88■■■■□ 3.65
KCNQ2-201ENST00000344425 FANCD2Q9BXW9 1451 aa37.82■■■■□ 3.64
KCNQ2-201ENST00000344425 CFTRP13569 1480 aa37.8■■■■□ 3.64
KCNQ2-201ENST00000344425 TOP2AP11388 1531 aaKnown RBP37.75■■■■□ 3.63
KCNQ2-201ENST00000344425 TRIM41Q8WV44 630 aa37.51■■■■□ 3.59
KCNQ2-201ENST00000344425 URB2Q14146 1524 aaKnown RBP37.48■■■■□ 3.59
KCNQ2-201ENST00000344425 OSCARQ8IYS5 282 aa37.38■■■■□ 3.57
KCNQ2-201ENST00000344425 CCDC88BA6NC98 1476 aa37.33■■■■□ 3.57
KCNQ2-201ENST00000344425 PRDM2Q13029 1718 aa37.3■■■■□ 3.56
KCNQ2-201ENST00000344425 IFT140Q96RY7 1462 aa37.15■■■■□ 3.54
KCNQ2-201ENST00000344425 TOPBP1Q92547 1522 aa37.07■■■■□ 3.53
KCNQ2-201ENST00000344425 ABCC8Q09428 1581 aa37.06■■■■□ 3.52
KCNQ2-201ENST00000344425 ZNF608Q9ULD9 1512 aaPredicted RBP37.04■■■■□ 3.52
KCNQ2-201ENST00000344425 DNMBPQ6XZF7 1577 aa36.92■■■■□ 3.5
KCNQ2-201ENST00000344425 EIF4G3O43432 1585 aaKnown RBP36.81■■■■□ 3.48
KCNQ2-201ENST00000344425 RIMBP3CA6NJZ7 1639 aa36.78■■■■□ 3.48
KCNQ2-201ENST00000344425 RIMBP3BA6NNM3 1639 aa36.78■■■■□ 3.48
KCNQ2-201ENST00000344425 RIMBP3Q9UFD9 1639 aa36.78■■■■□ 3.48
KCNQ2-201ENST00000344425 AQRO60306 1485 aaKnown RBP eCLIP36.72■■■■□ 3.47
KCNQ2-201ENST00000344425 TARBP1Q13395 1621 aaKnown RBP36.72■■■■□ 3.47
KCNQ2-201ENST00000344425 POLA1P09884 1462 aaPredicted RBP36.68■■■■□ 3.46
KCNQ2-201ENST00000344425 ARHGEF11O15085 1522 aa36.68■■■■□ 3.46
KCNQ2-201ENST00000344425 FBLN2P98095 1184 aa36.58■■■■□ 3.45
KCNQ2-201ENST00000344425 SOGA1O94964 1423 aa36.56■■■■□ 3.44
KCNQ2-201ENST00000344425 RAD54L2Q9Y4B4 1467 aa36.54■■■■□ 3.44
KCNQ2-201ENST00000344425 CHD1O14646 1710 aa36.53■■■■□ 3.44
KCNQ2-201ENST00000344425 TDRD9Q8NDG6 1382 aaKnown RBP36.5■■■■□ 3.43
KCNQ2-201ENST00000344425 CYB5RLQ6IPT4 315 aa36.49■■■■□ 3.43
KCNQ2-201ENST00000344425 FGD5Q6ZNL6 1462 aa36.44■■■■□ 3.42
KCNQ2-201ENST00000344425 WDR97A6NE52 1622 aa36.39■■■■□ 3.42
KCNQ2-201ENST00000344425 CUX1P39880 1505 aa36.36■■■■□ 3.41
KCNQ2-201ENST00000344425 SNAPC4Q5SXM2 1469 aa36.33■■■■□ 3.41
KCNQ2-201ENST00000344425 CHMP7Q8WUX9 453 aaPredicted RBP36.31■■■■□ 3.4
KCNQ2-201ENST00000344425 ARAP1Q96P48 1450 aa36.3■■■■□ 3.4
KCNQ2-201ENST00000344425 MAGI1Q96QZ7 1491 aaPredicted RBP36.26■■■■□ 3.39
KCNQ2-201ENST00000344425 GRIN2BQ13224 1484 aa36.25■■■■□ 3.39
KCNQ2-201ENST00000344425 SYNJ1O43426 1573 aa36.16■■■■□ 3.38
KCNQ2-201ENST00000344425 SUPT5HO00267 1087 aaKnown RBP36.16■■■■□ 3.38
KCNQ2-201ENST00000344425 TRHP20396 242 aaPredicted RBP36.16■■■■□ 3.38
KCNQ2-201ENST00000344425 CLASP1Q7Z460 1538 aa36.15■■■■□ 3.38
KCNQ2-201ENST00000344425 SYNJ2O15056 1496 aa36.14■■■■□ 3.38
KCNQ2-201ENST00000344425 GAPVD1Q14C86 1478 aa36.1■■■■□ 3.37
KCNQ2-201ENST00000344425 ABCA10Q8WWZ4 1543 aa36.03■■■■□ 3.36
KCNQ2-201ENST00000344425 PBRM1Q86U86 1689 aa36■■■■□ 3.35
KCNQ2-201ENST00000344425 ABCA5Q8WWZ7 1642 aa35.93■■■■□ 3.34
KCNQ2-201ENST00000344425 WRNQ14191 1432 aaPredicted RBP eCLIP35.9■■■■□ 3.34
KCNQ2-201ENST00000344425 GRIN2AQ12879 1464 aa35.76■■■■□ 3.32
KCNQ2-201ENST00000344425 TOP2BQ02880 1626 aa35.75■■■■□ 3.31
KCNQ2-201ENST00000344425 BIVM-ERCC5R4GMW8 1640 aa35.73■■■■□ 3.31
KCNQ2-201ENST00000344425 ADAMTS12P58397 1594 aa35.68■■■■□ 3.3
KCNQ2-201ENST00000344425 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
KCNQ2-201ENST00000344425 NUP160Q12769 1436 aa35.65■■■■□ 3.3
KCNQ2-201ENST00000344425 CEP170Q5SW79 1584 aa35.59■■■■□ 3.29
KCNQ2-201ENST00000344425 ERICH3Q5RHP9 1530 aa35.59■■■■□ 3.29
KCNQ2-201ENST00000344425 ERCC6L2Q5T890 1561 aa35.54■■■■□ 3.28
KCNQ2-201ENST00000344425 SHROOM2Q13796 1616 aa35.45■■■■□ 3.27
KCNQ2-201ENST00000344425 JPH4Q96JJ6 628 aa35.35■■■■□ 3.25
KCNQ2-201ENST00000344425 PRG4Q92954 1404 aaPredicted RBP35.34■■■■□ 3.25
KCNQ2-201ENST00000344425 AEBP2Q6ZN18 517 aaPredicted RBP35.23■■■■□ 3.23
KCNQ2-201ENST00000344425 RUSC2Q8N2Y8 1516 aa35.17■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms