RNA–Protein interactions for RNA: ENST00000397031.2

KRT18P29-201, Transcript of keratin 18 pseudogene 29, humanhuman

BASIC

Gene KRT18P29, Length 1,267 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P29-201ENST00000397031 NISCHQ9Y2I1 1504 aa50.23■■■■■ 5.63
KRT18P29-201ENST00000397031 ABCC9O60706 1549 aa45.34■■■■■ 4.85
KRT18P29-201ENST00000397031 CCDC180Q9P1Z9 1646 aa45.1■■■■■ 4.81
KRT18P29-201ENST00000397031 RB1CC1Q8TDY2 1594 aa43.07■■■■■ 4.48
KRT18P29-201ENST00000397031 NACADO15069 1562 aa42.72■■■■■ 4.43
KRT18P29-201ENST00000397031 DCAF8L2P0C7V8 631 aa42.65■■■■■ 4.42
KRT18P29-201ENST00000397031 DNAJC5BQ9UF47 199 aa42.61■■■■■ 4.41
KRT18P29-201ENST00000397031 PABPN1Q86U42 306 aaKnown RBP eCLIP42.22■■■■■ 4.35
KRT18P29-201ENST00000397031 MYO15BQ96JP2 1530 aa42.05■■■■■ 4.32
KRT18P29-201ENST00000397031 UNC13AQ9UPW8 1703 aa41.95■■■■■ 4.31
KRT18P29-201ENST00000397031 BICRAQ9NZM4 1560 aa41.73■■■■■ 4.27
KRT18P29-201ENST00000397031 ZCCHC6Q5VYS8 1495 aaKnown RBP41.59■■■■■ 4.25
KRT18P29-201ENST00000397031 DCAF1Q9Y4B6 1507 aa41.46■■■■■ 4.23
KRT18P29-201ENST00000397031 SHROOM4Q9ULL8 1493 aa41.22■■■■■ 4.19
KRT18P29-201ENST00000397031 SCRIBQ14160 1630 aa41.14■■■■■ 4.18
KRT18P29-201ENST00000397031 CC2D2AQ9P2K1 1620 aa40.89■■■■■ 4.14
KRT18P29-201ENST00000397031 CECR2Q9BXF3 1484 aa40.86■■■■■ 4.13
KRT18P29-201ENST00000397031 EIF4G1Q04637 1599 aaKnown RBP40.78■■■■■ 4.12
KRT18P29-201ENST00000397031 NCAPD3P42695 1498 aa39.44■■■■□ 3.9
KRT18P29-201ENST00000397031 ATAD2BQ9ULI0 1458 aa39.3■■■■□ 3.88
KRT18P29-201ENST00000397031 DNAJC5Q9H3Z4 198 aa39.29■■■■□ 3.88
KRT18P29-201ENST00000397031 ERCC6Q03468 1493 aa39.21■■■■□ 3.87
KRT18P29-201ENST00000397031 SMARCA2P51531 1590 aa39.21■■■■□ 3.87
KRT18P29-201ENST00000397031 SMARCA4P51532 1647 aa39.2■■■■□ 3.87
KRT18P29-201ENST00000397031 HMGXB3Q12766 1538 aa39.12■■■■□ 3.85
KRT18P29-201ENST00000397031 CUX2O14529 1486 aa39.11■■■■□ 3.85
KRT18P29-201ENST00000397031 BAZ1AQ9NRL2 1556 aaPredicted RBP39.03■■■■□ 3.84
KRT18P29-201ENST00000397031 BAZ1BQ9UIG0 1483 aaKnown RBP38.96■■■■□ 3.83
KRT18P29-201ENST00000397031 NESP48681 1621 aa38.87■■■■□ 3.81
KRT18P29-201ENST00000397031 PEG3Q9GZU2 1588 aa38.79■■■■□ 3.8
KRT18P29-201ENST00000397031 MROH2BQ7Z745 1585 aa38.7■■■■□ 3.79
KRT18P29-201ENST00000397031 LAMC3Q9Y6N6 1575 aa38.57■■■■□ 3.77
KRT18P29-201ENST00000397031 THOC2Q8NI27 1593 aaKnown RBP38.45■■■■□ 3.75
KRT18P29-201ENST00000397031 PDS5BQ9NTI5 1447 aa38.42■■■■□ 3.74
KRT18P29-201ENST00000397031 KIF21AQ7Z4S6 1674 aa38.31■■■■□ 3.72
KRT18P29-201ENST00000397031 CADPSQ9ULU8 1353 aa38.28■■■■□ 3.72
KRT18P29-201ENST00000397031 WIZO95785 1651 aa38.21■■■■□ 3.71
KRT18P29-201ENST00000397031 MRC2Q9UBG0 1479 aa38.06■■■■□ 3.68
KRT18P29-201ENST00000397031 WDR62O43379 1518 aa37.93■■■■□ 3.66
KRT18P29-201ENST00000397031 CEP164Q9UPV0 1460 aa37.9■■■■□ 3.66
KRT18P29-201ENST00000397031 RSF1Q96T23 1441 aaPredicted RBP37.87■■■■□ 3.65
KRT18P29-201ENST00000397031 FANCD2Q9BXW9 1451 aa37.84■■■■□ 3.65
KRT18P29-201ENST00000397031 CFTRP13569 1480 aa37.77■■■■□ 3.64
KRT18P29-201ENST00000397031 TOP2AP11388 1531 aaKnown RBP37.75■■■■□ 3.63
KRT18P29-201ENST00000397031 TRIM41Q8WV44 630 aa37.59■■■■□ 3.61
KRT18P29-201ENST00000397031 URB2Q14146 1524 aaKnown RBP37.5■■■■□ 3.59
KRT18P29-201ENST00000397031 OSCARQ8IYS5 282 aa37.39■■■■□ 3.58
KRT18P29-201ENST00000397031 CCDC88BA6NC98 1476 aa37.33■■■■□ 3.57
KRT18P29-201ENST00000397031 PRDM2Q13029 1718 aa37.29■■■■□ 3.56
KRT18P29-201ENST00000397031 IFT140Q96RY7 1462 aa37.14■■■■□ 3.54
KRT18P29-201ENST00000397031 TOPBP1Q92547 1522 aa37.08■■■■□ 3.53
KRT18P29-201ENST00000397031 ZNF608Q9ULD9 1512 aaPredicted RBP37.06■■■■□ 3.52
KRT18P29-201ENST00000397031 ABCC8Q09428 1581 aa37.04■■■■□ 3.52
KRT18P29-201ENST00000397031 DNMBPQ6XZF7 1577 aa36.92■■■■□ 3.5
KRT18P29-201ENST00000397031 EIF4G3O43432 1585 aaKnown RBP36.83■■■■□ 3.49
KRT18P29-201ENST00000397031 RIMBP3CA6NJZ7 1639 aa36.81■■■■□ 3.48
KRT18P29-201ENST00000397031 RIMBP3BA6NNM3 1639 aa36.81■■■■□ 3.48
KRT18P29-201ENST00000397031 RIMBP3Q9UFD9 1639 aa36.81■■■■□ 3.48
KRT18P29-201ENST00000397031 AQRO60306 1485 aaKnown RBP eCLIP36.75■■■■□ 3.47
KRT18P29-201ENST00000397031 TARBP1Q13395 1621 aaKnown RBP36.71■■■■□ 3.47
KRT18P29-201ENST00000397031 ARHGEF11O15085 1522 aa36.7■■■■□ 3.47
KRT18P29-201ENST00000397031 POLA1P09884 1462 aaPredicted RBP36.69■■■■□ 3.46
KRT18P29-201ENST00000397031 FBLN2P98095 1184 aa36.65■■■■□ 3.46
KRT18P29-201ENST00000397031 SOGA1O94964 1423 aa36.58■■■■□ 3.45
KRT18P29-201ENST00000397031 RAD54L2Q9Y4B4 1467 aa36.57■■■■□ 3.45
KRT18P29-201ENST00000397031 CHD1O14646 1710 aa36.56■■■■□ 3.44
KRT18P29-201ENST00000397031 CYB5RLQ6IPT4 315 aa36.53■■■■□ 3.44
KRT18P29-201ENST00000397031 TDRD9Q8NDG6 1382 aaKnown RBP36.53■■■■□ 3.44
KRT18P29-201ENST00000397031 FGD5Q6ZNL6 1462 aa36.45■■■■□ 3.43
KRT18P29-201ENST00000397031 CUX1P39880 1505 aa36.37■■■■□ 3.41
KRT18P29-201ENST00000397031 SNAPC4Q5SXM2 1469 aa36.37■■■■□ 3.41
KRT18P29-201ENST00000397031 WDR97A6NE52 1622 aa36.36■■■■□ 3.41
KRT18P29-201ENST00000397031 CHMP7Q8WUX9 453 aaPredicted RBP36.33■■■■□ 3.41
KRT18P29-201ENST00000397031 ARAP1Q96P48 1450 aa36.31■■■■□ 3.4
KRT18P29-201ENST00000397031 GRIN2BQ13224 1484 aa36.26■■■■□ 3.4
KRT18P29-201ENST00000397031 MAGI1Q96QZ7 1491 aaPredicted RBP36.25■■■■□ 3.39
KRT18P29-201ENST00000397031 TRHP20396 242 aaPredicted RBP36.23■■■■□ 3.39
KRT18P29-201ENST00000397031 SUPT5HO00267 1087 aaKnown RBP36.22■■■■□ 3.39
KRT18P29-201ENST00000397031 SYNJ1O43426 1573 aa36.19■■■■□ 3.38
KRT18P29-201ENST00000397031 CLASP1Q7Z460 1538 aa36.15■■■■□ 3.38
KRT18P29-201ENST00000397031 SYNJ2O15056 1496 aa36.15■■■■□ 3.38
KRT18P29-201ENST00000397031 GAPVD1Q14C86 1478 aa36.11■■■■□ 3.37
KRT18P29-201ENST00000397031 PBRM1Q86U86 1689 aa36.02■■■■□ 3.36
KRT18P29-201ENST00000397031 ABCA10Q8WWZ4 1543 aa36.02■■■■□ 3.36
KRT18P29-201ENST00000397031 ABCA5Q8WWZ7 1642 aa35.94■■■■□ 3.34
KRT18P29-201ENST00000397031 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.34
KRT18P29-201ENST00000397031 GRIN2AQ12879 1464 aa35.77■■■■□ 3.32
KRT18P29-201ENST00000397031 TOP2BQ02880 1626 aa35.75■■■■□ 3.31
KRT18P29-201ENST00000397031 BIVM-ERCC5R4GMW8 1640 aa35.72■■■■□ 3.31
KRT18P29-201ENST00000397031 ADAMTS12P58397 1594 aa35.7■■■■□ 3.31
KRT18P29-201ENST00000397031 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
KRT18P29-201ENST00000397031 NUP160Q12769 1436 aa35.64■■■■□ 3.3
KRT18P29-201ENST00000397031 CEP170Q5SW79 1584 aa35.61■■■■□ 3.29
KRT18P29-201ENST00000397031 ERCC6L2Q5T890 1561 aa35.58■■■■□ 3.29
KRT18P29-201ENST00000397031 ERICH3Q5RHP9 1530 aa35.57■■■■□ 3.28
KRT18P29-201ENST00000397031 SHROOM2Q13796 1616 aa35.45■■■■□ 3.27
KRT18P29-201ENST00000397031 PRG4Q92954 1404 aaPredicted RBP35.37■■■■□ 3.25
KRT18P29-201ENST00000397031 JPH4Q96JJ6 628 aa35.35■■■■□ 3.25
KRT18P29-201ENST00000397031 AEBP2Q6ZN18 517 aaPredicted RBP35.31■■■■□ 3.24
KRT18P29-201ENST00000397031 RUSC2Q8N2Y8 1516 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms