Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01558Q9Y6Z2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01558Q9Y6Z2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01558Q9Y6Z2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01558Q9Y6Z2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LINC01558Q9Y6Z2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01558Q9Y6Z2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC01558Q9Y6Z2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01558Q9Y6Z2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC01558Q9Y6Z2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01558Q9Y6Z2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01558Q9Y6Z2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01558Q9Y6Z2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01558Q9Y6Z2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01558Q9Y6Z2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01558Q9Y6Z2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01558Q9Y6Z2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01558Q9Y6Z2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01558Q9Y6Z2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01558Q9Y6Z2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01558Q9Y6Z2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01558Q9Y6Z2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01558Q9Y6Z2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01558Q9Y6Z2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01558Q9Y6Z2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC01558Q9Y6Z2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINC01558Q9Y6Z2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01558Q9Y6Z2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01558Q9Y6Z2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01558Q9Y6Z2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01558Q9Y6Z2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
LINC01558Q9Y6Z2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01558Q9Y6Z2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01558Q9Y6Z2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01558Q9Y6Z2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LINC01558Q9Y6Z2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 AC142086.6-201ENST00000621154 1765 ntBASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01558Q9Y6Z2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01558Q9Y6Z2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01558Q9Y6Z2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01558Q9Y6Z2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01558Q9Y6Z2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01558Q9Y6Z2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01558Q9Y6Z2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01558Q9Y6Z2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01558Q9Y6Z2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01558Q9Y6Z2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC01558Q9Y6Z2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01558Q9Y6Z2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01558Q9Y6Z2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01558Q9Y6Z2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01558Q9Y6Z2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01558Q9Y6Z2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms