Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SIGMAR1Q99720 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIGMAR1Q99720 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIGMAR1Q99720 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIGMAR1Q99720 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.38■□□□□ 0.53
SIGMAR1Q99720 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIGMAR1Q99720 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIGMAR1Q99720 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.37■□□□□ 0.53
SIGMAR1Q99720 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.36■□□□□ 0.53
SIGMAR1Q99720 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SIGMAR1Q99720 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIGMAR1Q99720 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIGMAR1Q99720 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.35■□□□□ 0.53
SIGMAR1Q99720 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIGMAR1Q99720 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIGMAR1Q99720 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIGMAR1Q99720 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.34■□□□□ 0.53
SIGMAR1Q99720 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SIGMAR1Q99720 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIGMAR1Q99720 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.33■□□□□ 0.52
SIGMAR1Q99720 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIGMAR1Q99720 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.33■□□□□ 0.52
SIGMAR1Q99720 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIGMAR1Q99720 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SIGMAR1Q99720 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIGMAR1Q99720 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIGMAR1Q99720 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SIGMAR1Q99720 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.3■□□□□ 0.52
SIGMAR1Q99720 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIGMAR1Q99720 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.3■□□□□ 0.52
SIGMAR1Q99720 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SIGMAR1Q99720 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.28■□□□□ 0.52
SIGMAR1Q99720 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIGMAR1Q99720 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIGMAR1Q99720 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIGMAR1Q99720 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.28■□□□□ 0.52
SIGMAR1Q99720 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SIGMAR1Q99720 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIGMAR1Q99720 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SIGMAR1Q99720 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIGMAR1Q99720 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIGMAR1Q99720 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.26■□□□□ 0.51
SIGMAR1Q99720 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIGMAR1Q99720 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIGMAR1Q99720 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIGMAR1Q99720 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIGMAR1Q99720 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIGMAR1Q99720 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIGMAR1Q99720 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIGMAR1Q99720 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIGMAR1Q99720 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIGMAR1Q99720 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIGMAR1Q99720 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIGMAR1Q99720 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIGMAR1Q99720 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.22■□□□□ 0.51
SIGMAR1Q99720 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIGMAR1Q99720 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIGMAR1Q99720 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIGMAR1Q99720 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
SIGMAR1Q99720 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.19■□□□□ 0.5
SIGMAR1Q99720 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIGMAR1Q99720 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIGMAR1Q99720 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIGMAR1Q99720 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.18■□□□□ 0.5
SIGMAR1Q99720 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIGMAR1Q99720 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.17■□□□□ 0.5
SIGMAR1Q99720 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIGMAR1Q99720 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIGMAR1Q99720 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIGMAR1Q99720 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIGMAR1Q99720 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SIGMAR1Q99720 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SIGMAR1Q99720 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.15■□□□□ 0.5
SIGMAR1Q99720 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.15■□□□□ 0.5
SIGMAR1Q99720 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIGMAR1Q99720 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SIGMAR1Q99720 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIGMAR1Q99720 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.13■□□□□ 0.49
SIGMAR1Q99720 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.12■□□□□ 0.49
SIGMAR1Q99720 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SIGMAR1Q99720 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.12■□□□□ 0.49
SIGMAR1Q99720 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIGMAR1Q99720 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIGMAR1Q99720 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIGMAR1Q99720 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIGMAR1Q99720 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SIGMAR1Q99720 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIGMAR1Q99720 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIGMAR1Q99720 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIGMAR1Q99720 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIGMAR1Q99720 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIGMAR1Q99720 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.08■□□□□ 0.48
SIGMAR1Q99720 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.07■□□□□ 0.48
SIGMAR1Q99720 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIGMAR1Q99720 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIGMAR1Q99720 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIGMAR1Q99720 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIGMAR1Q99720 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIGMAR1Q99720 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIGMAR1Q99720 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms