Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 MIR3648-1-201ENST00000615959 180 ntBASIC39.88■■■■□ 3.97
LTBP4Q8N2S1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC39.88■■■■□ 3.97
LTBP4Q8N2S1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
LTBP4Q8N2S1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
LTBP4Q8N2S1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
LTBP4Q8N2S1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC39.85■■■■□ 3.97
LTBP4Q8N2S1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.85■■■■□ 3.97
LTBP4Q8N2S1 DUX4L29-201ENST00000425409 679 ntBASIC39.84■■■■□ 3.97
LTBP4Q8N2S1 ABHD17AP3-201ENST00000503096 1137 ntBASIC39.83■■■■□ 3.97
LTBP4Q8N2S1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC39.81■■■■□ 3.96
LTBP4Q8N2S1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.8■■■■□ 3.96
LTBP4Q8N2S1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC39.8■■■■□ 3.96
LTBP4Q8N2S1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC39.8■■■■□ 3.96
LTBP4Q8N2S1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
LTBP4Q8N2S1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.95
LTBP4Q8N2S1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC39.74■■■■□ 3.95
LTBP4Q8N2S1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC39.74■■■■□ 3.95
LTBP4Q8N2S1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC39.74■■■■□ 3.95
LTBP4Q8N2S1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
LTBP4Q8N2S1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC39.73■■■■□ 3.95
LTBP4Q8N2S1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
LTBP4Q8N2S1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC39.71■■■■□ 3.95
LTBP4Q8N2S1 CR559946.2-201ENST00000623684 991 ntBASIC39.71■■■■□ 3.95
LTBP4Q8N2S1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC39.7■■■■□ 3.95
LTBP4Q8N2S1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC39.7■■■■□ 3.95
LTBP4Q8N2S1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
LTBP4Q8N2S1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC39.68■■■■□ 3.94
LTBP4Q8N2S1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC39.68■■■■□ 3.94
LTBP4Q8N2S1 AC021231.2-201ENST00000594613 730 ntBASIC39.67■■■■□ 3.94
LTBP4Q8N2S1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.67■■■■□ 3.94
LTBP4Q8N2S1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
LTBP4Q8N2S1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC39.64■■■■□ 3.94
LTBP4Q8N2S1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC39.64■■■■□ 3.94
LTBP4Q8N2S1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC39.64■■■■□ 3.94
LTBP4Q8N2S1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
LTBP4Q8N2S1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC39.62■■■■□ 3.93
LTBP4Q8N2S1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
LTBP4Q8N2S1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC39.59■■■■□ 3.93
LTBP4Q8N2S1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC39.59■■■■□ 3.93
LTBP4Q8N2S1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC39.57■■■■□ 3.92
LTBP4Q8N2S1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC39.57■■■■□ 3.92
LTBP4Q8N2S1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC39.57■■■■□ 3.92
LTBP4Q8N2S1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
LTBP4Q8N2S1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
LTBP4Q8N2S1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC39.53■■■■□ 3.92
LTBP4Q8N2S1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC39.51■■■■□ 3.92
LTBP4Q8N2S1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC39.49■■■■□ 3.91
LTBP4Q8N2S1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.48■■■■□ 3.91
LTBP4Q8N2S1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC39.48■■■■□ 3.91
LTBP4Q8N2S1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC39.47■■■■□ 3.91
LTBP4Q8N2S1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
LTBP4Q8N2S1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.44■■■■□ 3.9
LTBP4Q8N2S1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
LTBP4Q8N2S1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC39.43■■■■□ 3.9
LTBP4Q8N2S1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
LTBP4Q8N2S1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
LTBP4Q8N2S1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
LTBP4Q8N2S1 DUX4L11-201ENST00000611504 1267 ntBASIC39.4■■■■□ 3.9
LTBP4Q8N2S1 DUX4L12-201ENST00000614593 1267 ntBASIC39.4■■■■□ 3.9
LTBP4Q8N2S1 DUX4L14-201ENST00000621227 1267 ntBASIC39.4■■■■□ 3.9
LTBP4Q8N2S1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
LTBP4Q8N2S1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC39.39■■■■□ 3.9
LTBP4Q8N2S1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
LTBP4Q8N2S1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
LTBP4Q8N2S1 ABHD17AP5-201ENST00000580133 923 ntBASIC39.37■■■■□ 3.89
LTBP4Q8N2S1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC39.34■■■■□ 3.89
LTBP4Q8N2S1 RARRES2P2-201ENST00000394842 485 ntBASIC39.34■■■■□ 3.89
LTBP4Q8N2S1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
LTBP4Q8N2S1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
LTBP4Q8N2S1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC39.32■■■■□ 3.89
LTBP4Q8N2S1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
LTBP4Q8N2S1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC39.29■■■■□ 3.88
LTBP4Q8N2S1 LINC01971-201ENST00000617888 1048 ntBASIC39.29■■■■□ 3.88
LTBP4Q8N2S1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC39.26■■■■□ 3.88
LTBP4Q8N2S1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
LTBP4Q8N2S1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC39.23■■■■□ 3.87
LTBP4Q8N2S1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC39.22■■■■□ 3.87
LTBP4Q8N2S1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC39.22■■■■□ 3.87
LTBP4Q8N2S1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
LTBP4Q8N2S1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC39.2■■■■□ 3.87
LTBP4Q8N2S1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
LTBP4Q8N2S1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC39.18■■■■□ 3.86
LTBP4Q8N2S1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC39.18■■■■□ 3.86
LTBP4Q8N2S1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC39.14■■■■□ 3.86
LTBP4Q8N2S1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC39.13■■■■□ 3.85
LTBP4Q8N2S1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
LTBP4Q8N2S1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
LTBP4Q8N2S1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC39.1■■■■□ 3.85
LTBP4Q8N2S1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC39.09■■■■□ 3.85
LTBP4Q8N2S1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC39.08■■■■□ 3.85
LTBP4Q8N2S1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
LTBP4Q8N2S1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC39.07■■■■□ 3.84
LTBP4Q8N2S1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
LTBP4Q8N2S1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC39.05■■■■□ 3.84
LTBP4Q8N2S1 WASH5P-204ENST00000632292 975 ntBASIC39.05■■■■□ 3.84
LTBP4Q8N2S1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC39.04■■■■□ 3.84
LTBP4Q8N2S1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC39.04■■■■□ 3.84
LTBP4Q8N2S1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
LTBP4Q8N2S1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC39.03■■■■□ 3.84
LTBP4Q8N2S1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC39.03■■■■□ 3.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms