Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTTNQ86VV8 SETD8P1-201ENST00000623146 1180 ntBASIC23.84■■□□□ 1.41
RTTNQ86VV8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTTNQ86VV8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTTNQ86VV8 SUZ12P1-203ENST00000578195 985 ntBASIC23.82■■□□□ 1.4
RTTNQ86VV8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTTNQ86VV8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.8■■□□□ 1.4
RTTNQ86VV8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTTNQ86VV8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTTNQ86VV8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTTNQ86VV8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.78■■□□□ 1.4
RTTNQ86VV8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.78■■□□□ 1.4
RTTNQ86VV8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.76■■□□□ 1.39
RTTNQ86VV8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTTNQ86VV8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.75■■□□□ 1.39
RTTNQ86VV8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.75■■□□□ 1.39
RTTNQ86VV8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTTNQ86VV8 AC120057.4-201ENST00000624722 1615 ntBASIC23.75■■□□□ 1.39
RTTNQ86VV8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.75■■□□□ 1.39
RTTNQ86VV8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTTNQ86VV8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.73■■□□□ 1.39
RTTNQ86VV8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RTTNQ86VV8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTTNQ86VV8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTTNQ86VV8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RTTNQ86VV8 AL133380.1-201ENST00000506013 324 ntBASIC23.7■■□□□ 1.38
RTTNQ86VV8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTTNQ86VV8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTTNQ86VV8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.68■■□□□ 1.38
RTTNQ86VV8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RTTNQ86VV8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.67■■□□□ 1.38
RTTNQ86VV8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTTNQ86VV8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTTNQ86VV8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTTNQ86VV8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTTNQ86VV8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.65■■□□□ 1.38
RTTNQ86VV8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTTNQ86VV8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTTNQ86VV8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTTNQ86VV8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTTNQ86VV8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTTNQ86VV8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTTNQ86VV8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTTNQ86VV8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.63■■□□□ 1.37
RTTNQ86VV8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTTNQ86VV8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTTNQ86VV8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTTNQ86VV8 HLA-V-202ENST00000446817 847 ntBASIC23.62■■□□□ 1.37
RTTNQ86VV8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTTNQ86VV8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
RTTNQ86VV8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTTNQ86VV8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
RTTNQ86VV8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTTNQ86VV8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTTNQ86VV8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.57■■□□□ 1.36
RTTNQ86VV8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RTTNQ86VV8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RTTNQ86VV8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.57■■□□□ 1.36
RTTNQ86VV8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
RTTNQ86VV8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTTNQ86VV8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTTNQ86VV8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.55■■□□□ 1.36
RTTNQ86VV8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTTNQ86VV8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RTTNQ86VV8 AL391121.1-201ENST00000607967 1349 ntBASIC23.54■■□□□ 1.36
RTTNQ86VV8 ABCB10P1-201ENST00000614297 2181 ntBASIC23.54■■□□□ 1.36
RTTNQ86VV8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTTNQ86VV8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
RTTNQ86VV8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTTNQ86VV8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.52■■□□□ 1.35
RTTNQ86VV8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTTNQ86VV8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTTNQ86VV8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTTNQ86VV8 MIR7108-201ENST00000614319 87 ntBASIC23.51■■□□□ 1.35
RTTNQ86VV8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.5■■□□□ 1.35
RTTNQ86VV8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RTTNQ86VV8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.5■■□□□ 1.35
RTTNQ86VV8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
RTTNQ86VV8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RTTNQ86VV8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTTNQ86VV8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTTNQ86VV8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RTTNQ86VV8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.46■■□□□ 1.35
RTTNQ86VV8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTTNQ86VV8 CAHM-201ENST00000604200 896 ntBASIC23.44■■□□□ 1.34
RTTNQ86VV8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.44■■□□□ 1.34
RTTNQ86VV8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTTNQ86VV8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTTNQ86VV8 AL162393.1-201ENST00000437852 946 ntBASIC23.43■■□□□ 1.34
RTTNQ86VV8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTTNQ86VV8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTTNQ86VV8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTTNQ86VV8 WASH5P-204ENST00000632292 975 ntBASIC23.42■■□□□ 1.34
RTTNQ86VV8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTTNQ86VV8 ABHD17AP4-201ENST00000411545 909 ntBASIC23.41■■□□□ 1.34
RTTNQ86VV8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RTTNQ86VV8 AL161658.1-201ENST00000623641 1967 ntBASIC23.41■■□□□ 1.34
RTTNQ86VV8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTTNQ86VV8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RTTNQ86VV8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms