Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.23■■□□□ 1.95
RSPO4Q2I0M5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
RSPO4Q2I0M5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RSPO4Q2I0M5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RSPO4Q2I0M5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
RSPO4Q2I0M5 AC016575.1-201ENST00000607026 382 ntBASIC27.19■■□□□ 1.94
RSPO4Q2I0M5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
RSPO4Q2I0M5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RSPO4Q2I0M5 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.16■■□□□ 1.94
RSPO4Q2I0M5 MIR3648-2-201ENST00000581792 180 ntBASIC27.16■■□□□ 1.94
RSPO4Q2I0M5 MIR3648-1-201ENST00000615959 180 ntBASIC27.16■■□□□ 1.94
RSPO4Q2I0M5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RSPO4Q2I0M5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.15■■□□□ 1.94
RSPO4Q2I0M5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RSPO4Q2I0M5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.14■■□□□ 1.94
RSPO4Q2I0M5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.14■■□□□ 1.94
RSPO4Q2I0M5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RSPO4Q2I0M5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.11■■□□□ 1.93
RSPO4Q2I0M5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.11■■□□□ 1.93
RSPO4Q2I0M5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RSPO4Q2I0M5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.1■■□□□ 1.93
RSPO4Q2I0M5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.09■■□□□ 1.93
RSPO4Q2I0M5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RSPO4Q2I0M5 AC021231.2-201ENST00000594613 730 ntBASIC27.08■■□□□ 1.93
RSPO4Q2I0M5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RSPO4Q2I0M5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.06■■□□□ 1.92
RSPO4Q2I0M5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.06■■□□□ 1.92
RSPO4Q2I0M5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.06■■□□□ 1.92
RSPO4Q2I0M5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RSPO4Q2I0M5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RSPO4Q2I0M5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.03■■□□□ 1.92
RSPO4Q2I0M5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.01■■□□□ 1.91
RSPO4Q2I0M5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RSPO4Q2I0M5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27■■□□□ 1.91
RSPO4Q2I0M5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.99■■□□□ 1.91
RSPO4Q2I0M5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
RSPO4Q2I0M5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.98■■□□□ 1.91
RSPO4Q2I0M5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
RSPO4Q2I0M5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RSPO4Q2I0M5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
RSPO4Q2I0M5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
RSPO4Q2I0M5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.95■■□□□ 1.9
RSPO4Q2I0M5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
RSPO4Q2I0M5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RSPO4Q2I0M5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RSPO4Q2I0M5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RSPO4Q2I0M5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.92■■□□□ 1.9
RSPO4Q2I0M5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.92■■□□□ 1.9
RSPO4Q2I0M5 CR559946.2-201ENST00000623684 991 ntBASIC26.92■■□□□ 1.9
RSPO4Q2I0M5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.91■■□□□ 1.9
RSPO4Q2I0M5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RSPO4Q2I0M5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.88■■□□□ 1.89
RSPO4Q2I0M5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RSPO4Q2I0M5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RSPO4Q2I0M5 DUX4L11-201ENST00000611504 1267 ntBASIC26.87■■□□□ 1.89
RSPO4Q2I0M5 DUX4L12-201ENST00000614593 1267 ntBASIC26.87■■□□□ 1.89
RSPO4Q2I0M5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RSPO4Q2I0M5 DUX4L14-201ENST00000621227 1267 ntBASIC26.87■■□□□ 1.89
RSPO4Q2I0M5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RSPO4Q2I0M5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
RSPO4Q2I0M5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RSPO4Q2I0M5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RSPO4Q2I0M5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RSPO4Q2I0M5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RSPO4Q2I0M5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RSPO4Q2I0M5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RSPO4Q2I0M5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RSPO4Q2I0M5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.81■■□□□ 1.88
RSPO4Q2I0M5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RSPO4Q2I0M5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.8■■□□□ 1.88
RSPO4Q2I0M5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.8■■□□□ 1.88
RSPO4Q2I0M5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RSPO4Q2I0M5 LINC01971-201ENST00000617888 1048 ntBASIC26.78■■□□□ 1.88
RSPO4Q2I0M5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.78■■□□□ 1.88
RSPO4Q2I0M5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.77■■□□□ 1.88
RSPO4Q2I0M5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
RSPO4Q2I0M5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.75■■□□□ 1.87
RSPO4Q2I0M5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.75■■□□□ 1.87
RSPO4Q2I0M5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
RSPO4Q2I0M5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
RSPO4Q2I0M5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.74■■□□□ 1.87
RSPO4Q2I0M5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RSPO4Q2I0M5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.73■■□□□ 1.87
RSPO4Q2I0M5 ABHD17AP5-201ENST00000580133 923 ntBASIC26.73■■□□□ 1.87
RSPO4Q2I0M5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.72■■□□□ 1.87
RSPO4Q2I0M5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RSPO4Q2I0M5 RARRES2P2-201ENST00000394842 485 ntBASIC26.71■■□□□ 1.87
RSPO4Q2I0M5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.71■■□□□ 1.87
RSPO4Q2I0M5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RSPO4Q2I0M5 WASH5P-204ENST00000632292 975 ntBASIC26.7■■□□□ 1.86
RSPO4Q2I0M5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
RSPO4Q2I0M5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.68■■□□□ 1.86
RSPO4Q2I0M5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RSPO4Q2I0M5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RSPO4Q2I0M5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RSPO4Q2I0M5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
RSPO4Q2I0M5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RSPO4Q2I0M5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RSPO4Q2I0M5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RSPO4Q2I0M5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms