Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV3P03979 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRGV3P03979 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRGV3P03979 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.25■□□□□ 0.99
TRGV3P03979 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV3P03979 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV3P03979 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV3P03979 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.24■□□□□ 0.99
TRGV3P03979 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TRGV3P03979 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV3P03979 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRGV3P03979 AC136428.2-201ENST00000563187 214 ntBASIC21.22■□□□□ 0.99
TRGV3P03979 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRGV3P03979 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRGV3P03979 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.21■□□□□ 0.99
TRGV3P03979 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV3P03979 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRGV3P03979 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRGV3P03979 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRGV3P03979 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.19■□□□□ 0.98
TRGV3P03979 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TRGV3P03979 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRGV3P03979 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.18■□□□□ 0.98
TRGV3P03979 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRGV3P03979 WASH5P-204ENST00000632292 975 ntBASIC21.16■□□□□ 0.98
TRGV3P03979 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.15■□□□□ 0.98
TRGV3P03979 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRGV3P03979 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.14■□□□□ 0.97
TRGV3P03979 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.14■□□□□ 0.97
TRGV3P03979 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRGV3P03979 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRGV3P03979 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRGV3P03979 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRGV3P03979 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRGV3P03979 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.11■□□□□ 0.97
TRGV3P03979 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.11■□□□□ 0.97
TRGV3P03979 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRGV3P03979 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRGV3P03979 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRGV3P03979 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRGV3P03979 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
TRGV3P03979 AL391121.1-201ENST00000607967 1349 ntBASIC21.1■□□□□ 0.97
TRGV3P03979 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRGV3P03979 CAHM-201ENST00000604200 896 ntBASIC21.09■□□□□ 0.97
TRGV3P03979 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRGV3P03979 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRGV3P03979 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
TRGV3P03979 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.07■□□□□ 0.96
TRGV3P03979 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.07■□□□□ 0.96
TRGV3P03979 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.07■□□□□ 0.96
TRGV3P03979 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.07■□□□□ 0.96
TRGV3P03979 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRGV3P03979 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.06■□□□□ 0.96
TRGV3P03979 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRGV3P03979 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRGV3P03979 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
TRGV3P03979 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRGV3P03979 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRGV3P03979 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRGV3P03979 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRGV3P03979 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.03■□□□□ 0.96
TRGV3P03979 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRGV3P03979 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRGV3P03979 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRGV3P03979 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRGV3P03979 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
TRGV3P03979 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.98■□□□□ 0.95
TRGV3P03979 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRGV3P03979 SUZ12P1-203ENST00000578195 985 ntBASIC20.98■□□□□ 0.95
TRGV3P03979 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
TRGV3P03979 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRGV3P03979 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRGV3P03979 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.96■□□□□ 0.95
TRGV3P03979 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.95■□□□□ 0.94
TRGV3P03979 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRGV3P03979 AL161658.1-201ENST00000623641 1967 ntBASIC20.95■□□□□ 0.94
TRGV3P03979 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRGV3P03979 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.94■□□□□ 0.94
TRGV3P03979 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.92■□□□□ 0.94
TRGV3P03979 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV3P03979 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.92■□□□□ 0.94
TRGV3P03979 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRGV3P03979 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.91■□□□□ 0.94
TRGV3P03979 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRGV3P03979 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV3P03979 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV3P03979 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV3P03979 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV3P03979 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV3P03979 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.9■□□□□ 0.94
TRGV3P03979 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV3P03979 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRGV3P03979 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
TRGV3P03979 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.89■□□□□ 0.93
TRGV3P03979 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV3P03979 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV3P03979 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV3P03979 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV3P03979 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV3P03979 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms