Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFPL3O75679 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.67■■□□□ 1.86
RFPL3O75679 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.67■■□□□ 1.86
RFPL3O75679 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.67■■□□□ 1.86
RFPL3O75679 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.66■■□□□ 1.86
RFPL3O75679 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RFPL3O75679 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.65■■□□□ 1.86
RFPL3O75679 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
RFPL3O75679 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RFPL3O75679 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.64■■□□□ 1.86
RFPL3O75679 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RFPL3O75679 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.62■■□□□ 1.85
RFPL3O75679 ZNRF2P2-203ENST00000454624 420 ntBASIC26.6■■□□□ 1.85
RFPL3O75679 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.59■■□□□ 1.85
RFPL3O75679 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFPL3O75679 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RFPL3O75679 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.55■■□□□ 1.84
RFPL3O75679 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
RFPL3O75679 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFPL3O75679 WASH5P-204ENST00000632292 975 ntBASIC26.52■■□□□ 1.84
RFPL3O75679 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFPL3O75679 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.5■■□□□ 1.83
RFPL3O75679 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.5■■□□□ 1.83
RFPL3O75679 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RFPL3O75679 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFPL3O75679 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.49■■□□□ 1.83
RFPL3O75679 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFPL3O75679 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.49■■□□□ 1.83
RFPL3O75679 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFPL3O75679 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RFPL3O75679 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFPL3O75679 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFPL3O75679 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.48■■□□□ 1.83
RFPL3O75679 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
RFPL3O75679 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RFPL3O75679 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RFPL3O75679 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RFPL3O75679 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RFPL3O75679 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RFPL3O75679 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RFPL3O75679 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RFPL3O75679 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.43■■□□□ 1.82
RFPL3O75679 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
RFPL3O75679 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
RFPL3O75679 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.41■■□□□ 1.82
RFPL3O75679 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
RFPL3O75679 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RFPL3O75679 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.39■■□□□ 1.82
RFPL3O75679 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFPL3O75679 DUX4L29-201ENST00000425409 679 ntBASIC26.38■■□□□ 1.81
RFPL3O75679 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RFPL3O75679 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.37■■□□□ 1.81
RFPL3O75679 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
RFPL3O75679 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFPL3O75679 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.36■■□□□ 1.81
RFPL3O75679 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RFPL3O75679 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RFPL3O75679 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFPL3O75679 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFPL3O75679 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RFPL3O75679 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RFPL3O75679 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFPL3O75679 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFPL3O75679 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.31■■□□□ 1.8
RFPL3O75679 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFPL3O75679 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFPL3O75679 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFPL3O75679 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.29■■□□□ 1.8
RFPL3O75679 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFPL3O75679 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFPL3O75679 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFPL3O75679 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.27■■□□□ 1.8
RFPL3O75679 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFPL3O75679 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.24■■□□□ 1.79
RFPL3O75679 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFPL3O75679 MIR4449-201ENST00000578365 66 ntBASIC26.23■■□□□ 1.79
RFPL3O75679 AC021231.2-201ENST00000594613 730 ntBASIC26.23■■□□□ 1.79
RFPL3O75679 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFPL3O75679 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.22■■□□□ 1.79
RFPL3O75679 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
RFPL3O75679 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RFPL3O75679 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.21■■□□□ 1.79
RFPL3O75679 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RFPL3O75679 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RFPL3O75679 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.2■■□□□ 1.78
RFPL3O75679 MIR639-201ENST00000384974 98 ntBASIC26.19■■□□□ 1.78
RFPL3O75679 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RFPL3O75679 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RFPL3O75679 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFPL3O75679 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RFPL3O75679 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.16■■□□□ 1.78
RFPL3O75679 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RFPL3O75679 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
RFPL3O75679 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RFPL3O75679 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFPL3O75679 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.14■■□□□ 1.78
RFPL3O75679 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RFPL3O75679 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RFPL3O75679 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.13■■□□□ 1.77
RFPL3O75679 AC108673.1-201ENST00000510422 1159 ntBASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms