Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.97■■□□□ 1.91
SPTBN2O15020 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SPTBN2O15020 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
SPTBN2O15020 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
SPTBN2O15020 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.94■■□□□ 1.9
SPTBN2O15020 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPTBN2O15020 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPTBN2O15020 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.93■■□□□ 1.9
SPTBN2O15020 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPTBN2O15020 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.92■■□□□ 1.9
SPTBN2O15020 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
SPTBN2O15020 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.91■■□□□ 1.9
SPTBN2O15020 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.91■■□□□ 1.9
SPTBN2O15020 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.9■■□□□ 1.9
SPTBN2O15020 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
SPTBN2O15020 AC016575.1-201ENST00000607026 382 ntBASIC26.9■■□□□ 1.9
SPTBN2O15020 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SPTBN2O15020 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SPTBN2O15020 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SPTBN2O15020 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPTBN2O15020 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPTBN2O15020 DUX4L29-201ENST00000425409 679 ntBASIC26.84■■□□□ 1.89
SPTBN2O15020 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SPTBN2O15020 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.84■■□□□ 1.89
SPTBN2O15020 CR559946.2-201ENST00000623684 991 ntBASIC26.82■■□□□ 1.88
SPTBN2O15020 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SPTBN2O15020 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPTBN2O15020 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.78■■□□□ 1.88
SPTBN2O15020 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.77■■□□□ 1.88
SPTBN2O15020 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.77■■□□□ 1.88
SPTBN2O15020 AC021231.2-201ENST00000594613 730 ntBASIC26.76■■□□□ 1.87
SPTBN2O15020 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SPTBN2O15020 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.75■■□□□ 1.87
SPTBN2O15020 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.75■■□□□ 1.87
SPTBN2O15020 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SPTBN2O15020 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.74■■□□□ 1.87
SPTBN2O15020 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SPTBN2O15020 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SPTBN2O15020 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.72■■□□□ 1.87
SPTBN2O15020 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPTBN2O15020 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.72■■□□□ 1.87
SPTBN2O15020 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.72■■□□□ 1.87
SPTBN2O15020 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SPTBN2O15020 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SPTBN2O15020 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SPTBN2O15020 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.69■■□□□ 1.86
SPTBN2O15020 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPTBN2O15020 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SPTBN2O15020 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
SPTBN2O15020 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.67■■□□□ 1.86
SPTBN2O15020 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SPTBN2O15020 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.66■■□□□ 1.86
SPTBN2O15020 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SPTBN2O15020 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPTBN2O15020 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.65■■□□□ 1.86
SPTBN2O15020 RARRES2P2-201ENST00000394842 485 ntBASIC26.65■■□□□ 1.86
SPTBN2O15020 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SPTBN2O15020 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SPTBN2O15020 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
SPTBN2O15020 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.63■■□□□ 1.85
SPTBN2O15020 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPTBN2O15020 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SPTBN2O15020 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPTBN2O15020 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SPTBN2O15020 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SPTBN2O15020 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.54■■□□□ 1.84
SPTBN2O15020 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.54■■□□□ 1.84
SPTBN2O15020 ABHD17AP5-201ENST00000580133 923 ntBASIC26.53■■□□□ 1.84
SPTBN2O15020 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.84
SPTBN2O15020 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.51■■□□□ 1.84
SPTBN2O15020 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SPTBN2O15020 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SPTBN2O15020 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
SPTBN2O15020 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPTBN2O15020 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
SPTBN2O15020 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.49■■□□□ 1.83
SPTBN2O15020 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SPTBN2O15020 DUX4L11-201ENST00000611504 1267 ntBASIC26.48■■□□□ 1.83
SPTBN2O15020 DUX4L12-201ENST00000614593 1267 ntBASIC26.48■■□□□ 1.83
SPTBN2O15020 DUX4L14-201ENST00000621227 1267 ntBASIC26.48■■□□□ 1.83
SPTBN2O15020 LINC01971-201ENST00000617888 1048 ntBASIC26.47■■□□□ 1.83
SPTBN2O15020 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SPTBN2O15020 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.47■■□□□ 1.83
SPTBN2O15020 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
SPTBN2O15020 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.46■■□□□ 1.83
SPTBN2O15020 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SPTBN2O15020 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SPTBN2O15020 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.43■■□□□ 1.82
SPTBN2O15020 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.43■■□□□ 1.82
SPTBN2O15020 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPTBN2O15020 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SPTBN2O15020 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
SPTBN2O15020 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.42■■□□□ 1.82
SPTBN2O15020 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SPTBN2O15020 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SPTBN2O15020 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.4■■□□□ 1.82
SPTBN2O15020 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.4■■□□□ 1.82
SPTBN2O15020 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SPTBN2O15020 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SPTBN2O15020 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms