Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHAC2Q9Y5I4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHAC2Q9Y5I4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHAC2Q9Y5I4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHAC2Q9Y5I4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHAC2Q9Y5I4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 ANOS2P-203ENST00000472227 1816 ntBASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 GUSBP6-202ENST00000438529 1198 ntBASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHAC2Q9Y5I4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHAC2Q9Y5I4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHAC2Q9Y5I4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHAC2Q9Y5I4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 APTR-205ENST00000447009 902 ntTSL 2 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26■■□□□ 1.75
PCDHAC2Q9Y5I4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 AC083906.2-201ENST00000511578 360 ntBASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
PCDHAC2Q9Y5I4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PCDHAC2Q9Y5I4 AC009237.3-201ENST00000393279 1427 ntBASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 AL138781.1-201ENST00000566567 1274 ntBASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 AC142086.2-201ENST00000569753 217 ntBASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHAC2Q9Y5I4 AC055733.4-201ENST00000638462 1354 ntBASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 TSPY6P-201ENST00000448518 926 ntBASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 SLC7A5P2-201ENST00000553010 536 ntBASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDHAC2Q9Y5I4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDHAC2Q9Y5I4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.95■■□□□ 1.74
PCDHAC2Q9Y5I4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHAC2Q9Y5I4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.95■■□□□ 1.74
PCDHAC2Q9Y5I4 AP001160.3-201ENST00000601484 763 ntBASIC25.95■■□□□ 1.74
PCDHAC2Q9Y5I4 AL121832.2-201ENST00000610979 668 ntBASIC25.95■■□□□ 1.74
PCDHAC2Q9Y5I4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PCDHAC2Q9Y5I4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHAC2Q9Y5I4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHAC2Q9Y5I4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDHAC2Q9Y5I4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHAC2Q9Y5I4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHAC2Q9Y5I4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHAC2Q9Y5I4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHAC2Q9Y5I4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms