Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM56-RWDD3S4R434 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM56-RWDD3S4R434 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM56-RWDD3S4R434 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM56-RWDD3S4R434 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM56-RWDD3S4R434 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM56-RWDD3S4R434 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM56-RWDD3S4R434 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM56-RWDD3S4R434 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 AC073130.3-201ENST00000624389 2278 ntBASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 MIR6722-201ENST00000617286 78 ntBASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM56-RWDD3S4R434 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 AC004687.1-201ENST00000579003 1625 ntBASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 FEM1AP4-201ENST00000443167 1987 ntBASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM56-RWDD3S4R434 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM56-RWDD3S4R434 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 MIR4508-201ENST00000584178 70 ntBASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 HSD17B1P1-201ENST00000590052 955 ntBASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 NTF6A-201ENST00000591175 560 ntBASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM56-RWDD3S4R434 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 AC010980.1-201ENST00000587192 1142 ntBASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM56-RWDD3S4R434 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms