Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 WRB-205ENST00000415847 707 ntTSL 38.41□□□□□ -1.069e-6■□□□□ 11.2
FUBP3Q96I24 GNAL-208ENST00000590228 585 ntTSL 44.44□□□□□ -1.79e-6■□□□□ 11.2
FUBP3Q96I24 CD46-210ENST00000462968 473 ntTSL 32.97□□□□□ -1.939e-6■□□□□ 11.2
FUBP3Q96I24 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.676e-7■□□□□ 11.2
FUBP3Q96I24 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)19.09■□□□□ 0.656e-7■□□□□ 11.2
FUBP3Q96I24 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.646e-7■□□□□ 11.2
FUBP3Q96I24 IL4I1-206ENST00000596022 747 ntTSL 218.13■□□□□ 0.496e-7■□□□□ 11.2
FUBP3Q96I24 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.396e-7■□□□□ 11.2
FUBP3Q96I24 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.126e-7■□□□□ 11.2
FUBP3Q96I24 IL4I1-207ENST00000597295 651 ntTSL 313.41□□□□□ -0.266e-7■□□□□ 11.2
FUBP3Q96I24 IL4I1-205ENST00000596011 714 ntTSL 212.65□□□□□ -0.386e-7■□□□□ 11.2
FUBP3Q96I24 LEMD3-202ENST00000539442 932 ntTSL 211.26□□□□□ -0.616e-7■□□□□ 11.2
FUBP3Q96I24 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.866e-7■□□□□ 11.2
FUBP3Q96I24 RGMB-206ENST00000508978 427 ntTSL 36.09□□□□□ -1.436e-7■□□□□ 11.2
FUBP3Q96I24 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.221e-9■□□□□ 11.2
FUBP3Q96I24 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.246e-10■□□□□ 11.2
FUBP3Q96I24 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.28■□□□□ 0.048e-45■□□□□ 11.2
FUBP3Q96I24 SLC35E1-207ENST00000593812 924 ntTSL 56.14□□□□□ -1.433e-6■□□□□ 11.2
FUBP3Q96I24 RPRD1B-201ENST00000373433 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.622e-6■□□□□ 11.1
FUBP3Q96I24 RPRD1B-208ENST00000618318 567 ntTSL 48.26□□□□□ -1.092e-6■□□□□ 11.1
FUBP3Q96I24 RPRD1B-207ENST00000614670 659 ntTSL 36.31□□□□□ -1.42e-6■□□□□ 11.1
FUBP3Q96I24 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.565e-10■□□□□ 11.1
FUBP3Q96I24 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.57■■□□□ 1.365e-10■□□□□ 11.1
FUBP3Q96I24 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.95■□□□□ 0.625e-10■□□□□ 11.1
FUBP3Q96I24 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.65e-10■□□□□ 11.1
FUBP3Q96I24 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.64■□□□□ 0.425e-10■□□□□ 11.1
FUBP3Q96I24 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.195e-10■□□□□ 11.1
FUBP3Q96I24 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC14.01□□□□□ -0.175e-10■□□□□ 11.1
FUBP3Q96I24 KANSL1-215ENST00000576870 2848 ntTSL 212.03□□□□□ -0.485e-10■□□□□ 11.1
FUBP3Q96I24 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC11.78□□□□□ -0.525e-10■□□□□ 11.1
FUBP3Q96I24 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.565e-10■□□□□ 11.1
FUBP3Q96I24 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.575e-10■□□□□ 11.1
FUBP3Q96I24 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.935e-10■□□□□ 11.1
FUBP3Q96I24 KANSL1-204ENST00000572218 9095 ntTSL 1 (best)8.85□□□□□ -0.995e-10■□□□□ 11.1
FUBP3Q96I24 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.262e-8■□□□□ 11.1
FUBP3Q96I24 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.352e-8■□□□□ 11.1
FUBP3Q96I24 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.51□□□□□ -1.852e-8■□□□□ 11.1
FUBP3Q96I24 SFT2D1-203ENST00000479490 2061 ntTSL 1 (best)11.36□□□□□ -0.593e-6■□□□□ 11.1
FUBP3Q96I24 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.123e-9■□□□□ 11.1
FUBP3Q96I24 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.443e-9■□□□□ 11.1
FUBP3Q96I24 BIRC2-204ENST00000527910 4073 ntTSL 1 (best)11.47□□□□□ -0.573e-9■□□□□ 11.1
FUBP3Q96I24 BIRC2-201ENST00000227758 3743 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.623e-9■□□□□ 11.1
FUBP3Q96I24 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.46■□□□□ 0.551e-6■□□□□ 11
FUBP3Q96I24 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.01□□□□□ -0.011e-6■□□□□ 11
FUBP3Q96I24 SOD2-203ENST00000367055 990 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.621e-6■□□□□ 11
FUBP3Q96I24 SOD2-216ENST00000546260 4302 ntTSL 59.63□□□□□ -0.871e-6■□□□□ 11
FUBP3Q96I24 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.271e-6■□□□□ 11
FUBP3Q96I24 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.49■■□□□ 1.511e-8■□□□□ 11
FUBP3Q96I24 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.471e-8■□□□□ 11
FUBP3Q96I24 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.26■■□□□ 1.471e-8■□□□□ 11
FUBP3Q96I24 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.65■■□□□ 1.381e-8■□□□□ 11
FUBP3Q96I24 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.161e-8■□□□□ 11
FUBP3Q96I24 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.45■□□□□ 0.71e-8■□□□□ 11
FUBP3Q96I24 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.691e-8■□□□□ 11
FUBP3Q96I24 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.341e-11■□□□□ 11
FUBP3Q96I24 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.331e-11■□□□□ 11
FUBP3Q96I24 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.71■□□□□ 0.271e-11■□□□□ 11
FUBP3Q96I24 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.16■□□□□ 0.021e-8■□□□□ 11
FUBP3Q96I24 ZNRF1-203ENST00000564320 607 ntTSL 39.2□□□□□ -0.941e-8■□□□□ 11
FUBP3Q96I24 ZNRF1-209ENST00000568511 485 ntTSL 49.05□□□□□ -0.961e-8■□□□□ 11
FUBP3Q96I24 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.711e-8■□□□□ 11
FUBP3Q96I24 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.14□□□□□ -1.751e-8■□□□□ 11
FUBP3Q96I24 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC8.92□□□□□ -0.981e-6■□□□□ 11
FUBP3Q96I24 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.721e-6■□□□□ 11
FUBP3Q96I24 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC9.47□□□□□ -0.896e-10■□□□□ 11
FUBP3Q96I24 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.11□□□□□ -1.596e-10■□□□□ 11
FUBP3Q96I24 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.4■□□□□ 0.542e-10■□□□□ 11
FUBP3Q96I24 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.022e-10■□□□□ 11
FUBP3Q96I24 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.427e-13■□□□□ 11
FUBP3Q96I24 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.437e-13■□□□□ 11
FUBP3Q96I24 PDIA3-202ENST00000434494 2107 ntTSL 214.95□□□□□ -0.022e-19■□□□□ 10.9
FUBP3Q96I24 PDIA3-201ENST00000300289 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.632e-19■□□□□ 10.9
FUBP3Q96I24 PDIA3-206ENST00000497349 739 ntTSL 26.97□□□□□ -1.292e-19■□□□□ 10.9
FUBP3Q96I24 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.28■■□□□ 14e-7■□□□□ 10.9
FUBP3Q96I24 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.944e-7■□□□□ 10.9
FUBP3Q96I24 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.761e-9■□□□□ 10.9
FUBP3Q96I24 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.631e-9■□□□□ 10.9
FUBP3Q96I24 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.421e-9■□□□□ 10.9
FUBP3Q96I24 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.311e-7■□□□□ 10.9
FUBP3Q96I24 SMIM14-206ENST00000512441 622 ntTSL 54.42□□□□□ -1.71e-7■□□□□ 10.9
FUBP3Q96I24 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.142e-7■□□□□ 10.9
FUBP3Q96I24 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.88□□□□□ -0.993e-7■□□□□ 10.9
FUBP3Q96I24 ATAD2-203ENST00000519124 4650 ntTSL 1 (best)6.31□□□□□ -1.43e-7■□□□□ 10.9
FUBP3Q96I24 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.471e-10■□□□□ 10.8
FUBP3Q96I24 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.275e-7■□□□□ 10.8
FUBP3Q96I24 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.49■□□□□ 0.235e-7■□□□□ 10.8
FUBP3Q96I24 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.061e-10■□□□□ 10.8
FUBP3Q96I24 CLSTN1-205ENST00000477264 2169 ntTSL 214.61□□□□□ -0.071e-10■□□□□ 10.8
FUBP3Q96I24 CLSTN1-203ENST00000435891 3829 ntTSL 210.36□□□□□ -0.751e-10■□□□□ 10.8
FUBP3Q96I24 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.67□□□□□ -1.667e-14■□□□□ 10.8
FUBP3Q96I24 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.291e-9■□□□□ 10.8
FUBP3Q96I24 MEAF6-206ENST00000475828 1408 ntTSL 215.11■□□□□ 0.011e-9■□□□□ 10.8
FUBP3Q96I24 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.151e-9■□□□□ 10.8
FUBP3Q96I24 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.05□□□□□ -0.161e-9■□□□□ 10.8
FUBP3Q96I24 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.481e-9■□□□□ 10.8
FUBP3Q96I24 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC12.04□□□□□ -0.481e-9■□□□□ 10.8
FUBP3Q96I24 SLC6A6-207ENST00000618278 6401 ntTSL 511.05□□□□□ -0.641e-9■□□□□ 10.8
FUBP3Q96I24 MEAF6-208ENST00000487788 1351 ntTSL 26.53□□□□□ -1.361e-9■□□□□ 10.8
FUBP3Q96I24 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.126e-7■□□□□ 10.8
FUBP3Q96I24 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.382e-6■□□□□ 10.8
Retrieved 100 of 4,568 protein–RNA pairs in 175.6 ms