RNA–Protein interactions for RNA: ENST00000614670.1

RPRD1B-207, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-207ENST00000614670 AEBP2Q6ZN18 517 aaPredicted RBP30.93■■■□□ 2.54
RPRD1B-207ENST00000614670 CHIC1Q5VXU3 224 aa29.32■■■□□ 2.28
RPRD1B-207ENST00000614670 SENP3Q9H4L4 574 aaPredicted RBP26.47■■□□□ 1.83
RPRD1B-207ENST00000614670 PHF23Q9BUL5 403 aaPredicted RBP26.08■■□□□ 1.77
RPRD1B-207ENST00000614670 FOXD1Q16676 465 aa24.64■■□□□ 1.54
RPRD1B-207ENST00000614670 PLPPR3Q6T4P5 718 aa23.4■■□□□ 1.34
RPRD1B-207ENST00000614670 MSH5O43196 834 aa23.16■■□□□ 1.3
RPRD1B-207ENST00000614670 PIAS4Q8N2W9 510 aaPredicted RBP22.98■■□□□ 1.27
RPRD1B-207ENST00000614670 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
RPRD1B-207ENST00000614670 ADRA2BP18089 450 aa22.84■■□□□ 1.25
RPRD1B-207ENST00000614670 POTEDQ86YR6 584 aa22.72■■□□□ 1.23
RPRD1B-207ENST00000614670 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
RPRD1B-207ENST00000614670 MAPK8IP2Q13387 824 aaPredicted RBP21■□□□□ 0.95
RPRD1B-207ENST00000614670 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
RPRD1B-207ENST00000614670 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
RPRD1B-207ENST00000614670 HOXD11P31277 338 aaPredicted RBP20.18■□□□□ 0.82
RPRD1B-207ENST00000614670 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
RPRD1B-207ENST00000614670 DCAF8L1A6NGE4 600 aa20.02■□□□□ 0.8
RPRD1B-207ENST00000614670 RNF216Q9NWF9 866 aaPredicted RBP20■□□□□ 0.79
RPRD1B-207ENST00000614670 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
RPRD1B-207ENST00000614670 RNF39Q9H2S5 420 aa19.73■□□□□ 0.75
RPRD1B-207ENST00000614670 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
RPRD1B-207ENST00000614670 DNAJC5BQ9UF47 199 aa19.6■□□□□ 0.73
RPRD1B-207ENST00000614670 C1QBPQ07021 282 aaKnown RBP19.47■□□□□ 0.71
RPRD1B-207ENST00000614670 NPM3O75607 178 aaKnown RBP19.35■□□□□ 0.69
RPRD1B-207ENST00000614670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.667e-14■□□□□ 8
RPRD1B-207ENST00000614670 KCNA4P22459 653 aa18.85■□□□□ 0.61
RPRD1B-207ENST00000614670 U3KPZ7 1027 aaPredicted RBP18.75■□□□□ 0.59
RPRD1B-207ENST00000614670 SLC4A2P04920 1241 aa18.51■□□□□ 0.55
RPRD1B-207ENST00000614670 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
RPRD1B-207ENST00000614670 CAPN15O75808 1086 aa18.47■□□□□ 0.55
RPRD1B-207ENST00000614670 DSG3P32926 999 aa18.43■□□□□ 0.54
RPRD1B-207ENST00000614670 APLP2Q06481 763 aa18.31■□□□□ 0.52
RPRD1B-207ENST00000614670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.52
RPRD1B-207ENST00000614670 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.52
RPRD1B-207ENST00000614670 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
RPRD1B-207ENST00000614670 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
RPRD1B-207ENST00000614670 SAMD1Q6SPF0 538 aaPredicted RBP18.13■□□□□ 0.49
RPRD1B-207ENST00000614670 ABCB7O75027 752 aa17.99■□□□□ 0.47
RPRD1B-207ENST00000614670 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
RPRD1B-207ENST00000614670 POTEHQ6S545 545 aa17.8■□□□□ 0.44
RPRD1B-207ENST00000614670 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
RPRD1B-207ENST00000614670 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
RPRD1B-207ENST00000614670 POLA2Q14181 598 aa17.65■□□□□ 0.42
RPRD1B-207ENST00000614670 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
RPRD1B-207ENST00000614670 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
RPRD1B-207ENST00000614670 ZBTB12Q9Y330 459 aaPredicted RBP17.36■□□□□ 0.37
RPRD1B-207ENST00000614670 ZBTB22O15209 634 aa17.31■□□□□ 0.36
RPRD1B-207ENST00000614670 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
RPRD1B-207ENST00000614670 ATXN8OSP0DMR3 200 aa17.21■□□□□ 0.35
RPRD1B-207ENST00000614670 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
RPRD1B-207ENST00000614670 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
RPRD1B-207ENST00000614670 REM2Q8IYK8 340 aaPredicted RBP16.99■□□□□ 0.31
RPRD1B-207ENST00000614670 FBLN2P98095 1184 aa16.84■□□□□ 0.29
RPRD1B-207ENST00000614670 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
RPRD1B-207ENST00000614670 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
RPRD1B-207ENST00000614670 SPDYE2Q495Y8 402 aa16.8■□□□□ 0.28
RPRD1B-207ENST00000614670 PITPNM1O00562 1244 aa16.79■□□□□ 0.28
RPRD1B-207ENST00000614670 PIP4P2Q8N4L2 257 aa16.79■□□□□ 0.28
RPRD1B-207ENST00000614670 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPRD1B-207ENST00000614670 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
RPRD1B-207ENST00000614670 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
RPRD1B-207ENST00000614670 SSUH2Q9Y2M2 353 aa16.55■□□□□ 0.24
RPRD1B-207ENST00000614670 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
RPRD1B-207ENST00000614670 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.24
RPRD1B-207ENST00000614670 HAX1O00165 279 aa16.51■□□□□ 0.23
RPRD1B-207ENST00000614670 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
RPRD1B-207ENST00000614670 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
RPRD1B-207ENST00000614670 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
RPRD1B-207ENST00000614670 EVX2Q03828 476 aa16.27■□□□□ 0.2
RPRD1B-207ENST00000614670 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
RPRD1B-207ENST00000614670 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
RPRD1B-207ENST00000614670 C19orf67A6NJJ6 358 aa16.18■□□□□ 0.18
RPRD1B-207ENST00000614670 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
RPRD1B-207ENST00000614670 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
RPRD1B-207ENST00000614670 GABBR2O75899 941 aa15.95■□□□□ 0.14
RPRD1B-207ENST00000614670 FARP1Q9Y4F1 1045 aaPredicted RBP15.93■□□□□ 0.14
RPRD1B-207ENST00000614670 STAG3Q9UJ98 1225 aa15.89■□□□□ 0.13
RPRD1B-207ENST00000614670 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
RPRD1B-207ENST00000614670 CD44P16070 742 aaKnown RBP15.84■□□□□ 0.13
RPRD1B-207ENST00000614670 CLCN6P51797 869 aa15.79■□□□□ 0.12
RPRD1B-207ENST00000614670 CREBZFQ9NS37 354 aa15.76■□□□□ 0.11
RPRD1B-207ENST00000614670 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
RPRD1B-207ENST00000614670 LHX8Q68G74 356 aa15.6■□□□□ 0.09
RPRD1B-207ENST00000614670 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
RPRD1B-207ENST00000614670 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
RPRD1B-207ENST00000614670 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
RPRD1B-207ENST00000614670 PROM2Q8N271 834 aa15.5■□□□□ 0.07
RPRD1B-207ENST00000614670 DCBLD2Q96PD2 775 aa15.49■□□□□ 0.07
RPRD1B-207ENST00000614670 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
RPRD1B-207ENST00000614670 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
RPRD1B-207ENST00000614670 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
RPRD1B-207ENST00000614670 PHF12Q96QT6 1004 aa15.33■□□□□ 0.04
RPRD1B-207ENST00000614670 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
RPRD1B-207ENST00000614670 MS4A3Q96HJ5 214 aa15.14■□□□□ 0.01
RPRD1B-207ENST00000614670 TSPYL2Q9H2G4 693 aaPredicted RBP15.14■□□□□ 0.01
RPRD1B-207ENST00000614670 MIER1Q8N108 512 aa15.13■□□□□ 0.01
RPRD1B-207ENST00000614670 CCDC61Q9Y6R9 512 aa15.13■□□□□ 0.01
RPRD1B-207ENST00000614670 ASTLQ6HA08 431 aaPredicted RBP15.12■□□□□ 0.01
RPRD1B-207ENST00000614670 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms