RNA–Protein interactions for RNA: ENST00000479490.1

SFT2D1-203, Transcript of SFT2 domain containing 1, humanhuman

TSL 1 (best)

Gene SFT2D1, Length 2,061 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-203ENST00000479490 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
SFT2D1-203ENST00000479490 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
SFT2D1-203ENST00000479490 ABCC9O60706 1549 aa20.08■□□□□ 0.81
SFT2D1-203ENST00000479490 SHROOM4Q9ULL8 1493 aa20.01■□□□□ 0.79
SFT2D1-203ENST00000479490 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
SFT2D1-203ENST00000479490 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
SFT2D1-203ENST00000479490 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
SFT2D1-203ENST00000479490 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
SFT2D1-203ENST00000479490 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
SFT2D1-203ENST00000479490 NACADO15069 1562 aa19.6■□□□□ 0.73
SFT2D1-203ENST00000479490 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
SFT2D1-203ENST00000479490 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
SFT2D1-203ENST00000479490 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
SFT2D1-203ENST00000479490 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
SFT2D1-203ENST00000479490 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
SFT2D1-203ENST00000479490 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
SFT2D1-203ENST00000479490 HRCP23327 699 aa18.81■□□□□ 0.6
SFT2D1-203ENST00000479490 PCGF6Q9BYE7 350 aa18.69■□□□□ 0.58
SFT2D1-203ENST00000479490 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
SFT2D1-203ENST00000479490 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
SFT2D1-203ENST00000479490 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
SFT2D1-203ENST00000479490 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
SFT2D1-203ENST00000479490 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
SFT2D1-203ENST00000479490 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
SFT2D1-203ENST00000479490 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
SFT2D1-203ENST00000479490 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
SFT2D1-203ENST00000479490 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
SFT2D1-203ENST00000479490 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
SFT2D1-203ENST00000479490 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
SFT2D1-203ENST00000479490 PEG3Q9GZU2 1588 aa18.2■□□□□ 0.5
SFT2D1-203ENST00000479490 WIZO95785 1651 aa18.19■□□□□ 0.5
SFT2D1-203ENST00000479490 CC2D2AQ9P2K1 1620 aa18.18■□□□□ 0.5
SFT2D1-203ENST00000479490 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
SFT2D1-203ENST00000479490 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
SFT2D1-203ENST00000479490 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
SFT2D1-203ENST00000479490 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
SFT2D1-203ENST00000479490 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
SFT2D1-203ENST00000479490 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
SFT2D1-203ENST00000479490 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
SFT2D1-203ENST00000479490 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
SFT2D1-203ENST00000479490 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.48
SFT2D1-203ENST00000479490 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
SFT2D1-203ENST00000479490 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
SFT2D1-203ENST00000479490 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
SFT2D1-203ENST00000479490 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
SFT2D1-203ENST00000479490 EEA1Q15075 1411 aa17.68■□□□□ 0.42
SFT2D1-203ENST00000479490 CEP162Q5TB80 1403 aa17.64■□□□□ 0.41
SFT2D1-203ENST00000479490 SOGA1O94964 1423 aa17.63■□□□□ 0.41
SFT2D1-203ENST00000479490 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
SFT2D1-203ENST00000479490 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
SFT2D1-203ENST00000479490 CFTRP13569 1480 aa17.59■□□□□ 0.41
SFT2D1-203ENST00000479490 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
SFT2D1-203ENST00000479490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
SFT2D1-203ENST00000479490 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
SFT2D1-203ENST00000479490 GOLGA3Q08378 1498 aa17.53■□□□□ 0.4
SFT2D1-203ENST00000479490 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
SFT2D1-203ENST00000479490 NESP48681 1621 aa17.52■□□□□ 0.4
SFT2D1-203ENST00000479490 RUSC2Q8N2Y8 1516 aa17.51■□□□□ 0.39
SFT2D1-203ENST00000479490 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
SFT2D1-203ENST00000479490 PRDM2Q13029 1718 aa17.45■□□□□ 0.38
SFT2D1-203ENST00000479490 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
SFT2D1-203ENST00000479490 KIF21BO75037 1637 aa17.42■□□□□ 0.38
SFT2D1-203ENST00000479490 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
SFT2D1-203ENST00000479490 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
SFT2D1-203ENST00000479490 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
SFT2D1-203ENST00000479490 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
SFT2D1-203ENST00000479490 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
SFT2D1-203ENST00000479490 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
SFT2D1-203ENST00000479490 CLIP1P30622 1438 aa17.3■□□□□ 0.36
SFT2D1-203ENST00000479490 ERCC6Q03468 1493 aa17.27■□□□□ 0.35
SFT2D1-203ENST00000479490 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.35
SFT2D1-203ENST00000479490 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
SFT2D1-203ENST00000479490 PELP1Q8IZL8 1130 aaKnown RBP17.24■□□□□ 0.35
SFT2D1-203ENST00000479490 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
SFT2D1-203ENST00000479490 RAPGEF2Q9Y4G8 1499 aa17.22■□□□□ 0.35
SFT2D1-203ENST00000479490 CUX1P39880 1505 aa17.21■□□□□ 0.35
SFT2D1-203ENST00000479490 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.34
SFT2D1-203ENST00000479490 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
SFT2D1-203ENST00000479490 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
SFT2D1-203ENST00000479490 URB2Q14146 1524 aaKnown RBP17.19■□□□□ 0.34
SFT2D1-203ENST00000479490 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
SFT2D1-203ENST00000479490 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
SFT2D1-203ENST00000479490 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
SFT2D1-203ENST00000479490 CENPBP07199 599 aaPredicted RBP17.14■□□□□ 0.33
SFT2D1-203ENST00000479490 APLP2Q06481 763 aa17.14■□□□□ 0.33
SFT2D1-203ENST00000479490 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
SFT2D1-203ENST00000479490 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
SFT2D1-203ENST00000479490 WDR62O43379 1518 aa17.13■□□□□ 0.33
SFT2D1-203ENST00000479490 NEUROD1Q13562 356 aa17.12■□□□□ 0.33
SFT2D1-203ENST00000479490 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
SFT2D1-203ENST00000479490 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
SFT2D1-203ENST00000479490 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
SFT2D1-203ENST00000479490 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
SFT2D1-203ENST00000479490 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
SFT2D1-203ENST00000479490 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
SFT2D1-203ENST00000479490 CUX2O14529 1486 aa16.99■□□□□ 0.31
SFT2D1-203ENST00000479490 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
SFT2D1-203ENST00000479490 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
SFT2D1-203ENST00000479490 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
SFT2D1-203ENST00000479490 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms