RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
RPRD1B-208ENST00000618318 NISCHQ9Y2I1 1504 aa17.61■□□□□ 0.41
RPRD1B-208ENST00000618318 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
RPRD1B-208ENST00000618318 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
RPRD1B-208ENST00000618318 ABCC9O60706 1549 aa15.55■□□□□ 0.08
RPRD1B-208ENST00000618318 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
RPRD1B-208ENST00000618318 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
RPRD1B-208ENST00000618318 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
RPRD1B-208ENST00000618318 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
RPRD1B-208ENST00000618318 RB1CC1Q8TDY2 1594 aa14.71□□□□□ -0.05
RPRD1B-208ENST00000618318 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
RPRD1B-208ENST00000618318 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
RPRD1B-208ENST00000618318 NACADO15069 1562 aa14.51□□□□□ -0.09
RPRD1B-208ENST00000618318 FOXD1Q16676 465 aa14.48□□□□□ -0.09
RPRD1B-208ENST00000618318 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.09
RPRD1B-208ENST00000618318 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.09
RPRD1B-208ENST00000618318 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
RPRD1B-208ENST00000618318 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.12
RPRD1B-208ENST00000618318 SHROOM4Q9ULL8 1493 aa14.32□□□□□ -0.12
RPRD1B-208ENST00000618318 CC2D2AQ9P2K1 1620 aa14.09□□□□□ -0.15
RPRD1B-208ENST00000618318 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
RPRD1B-208ENST00000618318 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
RPRD1B-208ENST00000618318 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
RPRD1B-208ENST00000618318 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
RPRD1B-208ENST00000618318 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
RPRD1B-208ENST00000618318 MSH5O43196 834 aa13.69□□□□□ -0.22
RPRD1B-208ENST00000618318 PLPPR3Q6T4P5 718 aa13.67□□□□□ -0.22
RPRD1B-208ENST00000618318 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
RPRD1B-208ENST00000618318 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
RPRD1B-208ENST00000618318 CUX2O14529 1486 aa13.59□□□□□ -0.23
RPRD1B-208ENST00000618318 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
RPRD1B-208ENST00000618318 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
RPRD1B-208ENST00000618318 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
RPRD1B-208ENST00000618318 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
RPRD1B-208ENST00000618318 ERCC6Q03468 1493 aa13.44□□□□□ -0.26
RPRD1B-208ENST00000618318 ADRA2BP18089 450 aa13.41□□□□□ -0.26
RPRD1B-208ENST00000618318 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
RPRD1B-208ENST00000618318 WIZO95785 1651 aa13.4□□□□□ -0.26
RPRD1B-208ENST00000618318 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
RPRD1B-208ENST00000618318 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
RPRD1B-208ENST00000618318 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
RPRD1B-208ENST00000618318 ATAD2BQ9ULI0 1458 aa13.34□□□□□ -0.27
RPRD1B-208ENST00000618318 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
RPRD1B-208ENST00000618318 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
RPRD1B-208ENST00000618318 THOC2Q8NI27 1593 aaKnown RBP13.3□□□□□ -0.28
RPRD1B-208ENST00000618318 NESP48681 1621 aa13.28□□□□□ -0.28
RPRD1B-208ENST00000618318 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
RPRD1B-208ENST00000618318 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
RPRD1B-208ENST00000618318 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
RPRD1B-208ENST00000618318 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
RPRD1B-208ENST00000618318 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
RPRD1B-208ENST00000618318 PDS5BQ9NTI5 1447 aa13.03□□□□□ -0.32
RPRD1B-208ENST00000618318 WDR62O43379 1518 aa13.01□□□□□ -0.33
RPRD1B-208ENST00000618318 MRC2Q9UBG0 1479 aa12.98□□□□□ -0.33
RPRD1B-208ENST00000618318 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
RPRD1B-208ENST00000618318 CFTRP13569 1480 aa12.94□□□□□ -0.34
RPRD1B-208ENST00000618318 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
RPRD1B-208ENST00000618318 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
RPRD1B-208ENST00000618318 ABCC8Q09428 1581 aa12.84□□□□□ -0.35
RPRD1B-208ENST00000618318 RIMBP3CA6NJZ7 1639 aa12.81□□□□□ -0.36
RPRD1B-208ENST00000618318 RIMBP3BA6NNM3 1639 aa12.81□□□□□ -0.36
RPRD1B-208ENST00000618318 RIMBP3Q9UFD9 1639 aa12.81□□□□□ -0.36
RPRD1B-208ENST00000618318 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
RPRD1B-208ENST00000618318 EEA1Q15075 1411 aa12.79□□□□□ -0.36
RPRD1B-208ENST00000618318 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
RPRD1B-208ENST00000618318 FAM9AQ8IZU1 332 aaPredicted RBP12.78□□□□□ -0.36
RPRD1B-208ENST00000618318 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
RPRD1B-208ENST00000618318 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
RPRD1B-208ENST00000618318 TOP2BQ02880 1626 aa12.73□□□□□ -0.37
RPRD1B-208ENST00000618318 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
RPRD1B-208ENST00000618318 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
RPRD1B-208ENST00000618318 SYNJ1O43426 1573 aa12.71□□□□□ -0.37
RPRD1B-208ENST00000618318 ARHGEF11O15085 1522 aa12.71□□□□□ -0.38
RPRD1B-208ENST00000618318 BIVM-ERCC5R4GMW8 1640 aa12.68□□□□□ -0.38
RPRD1B-208ENST00000618318 CUX1P39880 1505 aa12.67□□□□□ -0.38
RPRD1B-208ENST00000618318 SOGA1O94964 1423 aa12.66□□□□□ -0.38
RPRD1B-208ENST00000618318 ZNF608Q9ULD9 1512 aaPredicted RBP12.63□□□□□ -0.39
RPRD1B-208ENST00000618318 KIF27Q86VH2 1401 aa12.62□□□□□ -0.39
RPRD1B-208ENST00000618318 EIF4G3O43432 1585 aaKnown RBP12.61□□□□□ -0.39
RPRD1B-208ENST00000618318 DNMBPQ6XZF7 1577 aa12.61□□□□□ -0.39
RPRD1B-208ENST00000618318 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
RPRD1B-208ENST00000618318 CHD1O14646 1710 aa12.59□□□□□ -0.39
RPRD1B-208ENST00000618318 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
RPRD1B-208ENST00000618318 UBTFP17480 764 aaKnown RBP12.57□□□□□ -0.4
RPRD1B-208ENST00000618318 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
RPRD1B-208ENST00000618318 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
RPRD1B-208ENST00000618318 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
RPRD1B-208ENST00000618318 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
RPRD1B-208ENST00000618318 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
RPRD1B-208ENST00000618318 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
RPRD1B-208ENST00000618318 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.41
RPRD1B-208ENST00000618318 CYB5RLQ6IPT4 315 aa12.5□□□□□ -0.41
RPRD1B-208ENST00000618318 ABCA10Q8WWZ4 1543 aa12.5□□□□□ -0.41
RPRD1B-208ENST00000618318 TARBP1Q13395 1621 aaKnown RBP12.5□□□□□ -0.41
RPRD1B-208ENST00000618318 KIF21BO75037 1637 aa12.48□□□□□ -0.41
RPRD1B-208ENST00000618318 IGF1RP08069 1367 aa12.47□□□□□ -0.41
RPRD1B-208ENST00000618318 RAD54L2Q9Y4B4 1467 aa12.46□□□□□ -0.41
RPRD1B-208ENST00000618318 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
RPRD1B-208ENST00000618318 PRXQ9BXM0 1461 aa12.46□□□□□ -0.42
RPRD1B-208ENST00000618318 CARMIL1Q5VZK9 1371 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms