RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 NISCHQ9Y2I1 1504 aa22.63■■□□□ 1.21
RPRD1B-201ENST00000373433 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
RPRD1B-201ENST00000373433 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
RPRD1B-201ENST00000373433 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
RPRD1B-201ENST00000373433 ABCC9O60706 1549 aa19.17■□□□□ 0.66
RPRD1B-201ENST00000373433 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
RPRD1B-201ENST00000373433 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
RPRD1B-201ENST00000373433 HRCP23327 699 aa18.58■□□□□ 0.56
RPRD1B-201ENST00000373433 PABPN1Q86U42 306 aaKnown RBP eCLIP18.41■□□□□ 0.54
RPRD1B-201ENST00000373433 SCRIBQ14160 1630 aa18.37■□□□□ 0.53
RPRD1B-201ENST00000373433 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
RPRD1B-201ENST00000373433 PCGF6Q9BYE7 350 aa18.33■□□□□ 0.53
RPRD1B-201ENST00000373433 NACADO15069 1562 aa18.32■□□□□ 0.52
RPRD1B-201ENST00000373433 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
RPRD1B-201ENST00000373433 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
RPRD1B-201ENST00000373433 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
RPRD1B-201ENST00000373433 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
RPRD1B-201ENST00000373433 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
RPRD1B-201ENST00000373433 PELP1Q8IZL8 1130 aaKnown RBP17.96■□□□□ 0.47
RPRD1B-201ENST00000373433 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
RPRD1B-201ENST00000373433 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
RPRD1B-201ENST00000373433 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
RPRD1B-201ENST00000373433 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.42
RPRD1B-201ENST00000373433 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
RPRD1B-201ENST00000373433 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
RPRD1B-201ENST00000373433 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
RPRD1B-201ENST00000373433 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
RPRD1B-201ENST00000373433 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
RPRD1B-201ENST00000373433 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
RPRD1B-201ENST00000373433 ZEB1P37275 1124 aaPredicted RBP17.47■□□□□ 0.39
RPRD1B-201ENST00000373433 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
RPRD1B-201ENST00000373433 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
RPRD1B-201ENST00000373433 WIZO95785 1651 aa17.33■□□□□ 0.37
RPRD1B-201ENST00000373433 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
RPRD1B-201ENST00000373433 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
RPRD1B-201ENST00000373433 UNC13AQ9UPW8 1703 aa17.28■□□□□ 0.36
RPRD1B-201ENST00000373433 MYT1Q01538 1121 aa17.24■□□□□ 0.35
RPRD1B-201ENST00000373433 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
RPRD1B-201ENST00000373433 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
RPRD1B-201ENST00000373433 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
RPRD1B-201ENST00000373433 ACIN1Q9UKV3 1341 aaKnown RBP17.19■□□□□ 0.34
RPRD1B-201ENST00000373433 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
RPRD1B-201ENST00000373433 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
RPRD1B-201ENST00000373433 TOP2AP11388 1531 aaKnown RBP17.13■□□□□ 0.33
RPRD1B-201ENST00000373433 GTF3C3Q9Y5Q9 886 aa17.12■□□□□ 0.33
RPRD1B-201ENST00000373433 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
RPRD1B-201ENST00000373433 CENPBP07199 599 aaPredicted RBP17.05■□□□□ 0.32
RPRD1B-201ENST00000373433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
RPRD1B-201ENST00000373433 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
RPRD1B-201ENST00000373433 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
RPRD1B-201ENST00000373433 APLP2Q06481 763 aa16.95■□□□□ 0.3
RPRD1B-201ENST00000373433 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
RPRD1B-201ENST00000373433 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
RPRD1B-201ENST00000373433 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
RPRD1B-201ENST00000373433 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
RPRD1B-201ENST00000373433 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
RPRD1B-201ENST00000373433 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
RPRD1B-201ENST00000373433 CADPSQ9ULU8 1353 aa16.84■□□□□ 0.29
RPRD1B-201ENST00000373433 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
RPRD1B-201ENST00000373433 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
RPRD1B-201ENST00000373433 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
RPRD1B-201ENST00000373433 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
RPRD1B-201ENST00000373433 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
RPRD1B-201ENST00000373433 SOGA1O94964 1423 aa16.68■□□□□ 0.26
RPRD1B-201ENST00000373433 FBLN2P98095 1184 aa16.68■□□□□ 0.26
RPRD1B-201ENST00000373433 ERCC6Q03468 1493 aa16.68■□□□□ 0.26
RPRD1B-201ENST00000373433 EEA1Q15075 1411 aa16.63■□□□□ 0.25
RPRD1B-201ENST00000373433 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
RPRD1B-201ENST00000373433 CFTRP13569 1480 aa16.62■□□□□ 0.25
RPRD1B-201ENST00000373433 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
RPRD1B-201ENST00000373433 NESP48681 1621 aa16.6■□□□□ 0.25
RPRD1B-201ENST00000373433 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
RPRD1B-201ENST00000373433 ZNF316A6NFI3 1004 aaPredicted RBP16.55■□□□□ 0.24
RPRD1B-201ENST00000373433 CUX2O14529 1486 aa16.54■□□□□ 0.24
RPRD1B-201ENST00000373433 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
RPRD1B-201ENST00000373433 RUSC2Q8N2Y8 1516 aa16.49■□□□□ 0.23
RPRD1B-201ENST00000373433 GOLGA3Q08378 1498 aa16.48■□□□□ 0.23
RPRD1B-201ENST00000373433 MIER1Q8N108 512 aa16.48■□□□□ 0.23
RPRD1B-201ENST00000373433 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
RPRD1B-201ENST00000373433 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
RPRD1B-201ENST00000373433 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
RPRD1B-201ENST00000373433 ITGAEP38570 1179 aa16.43■□□□□ 0.22
RPRD1B-201ENST00000373433 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
RPRD1B-201ENST00000373433 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
RPRD1B-201ENST00000373433 FGD5Q6ZNL6 1462 aa16.41■□□□□ 0.22
RPRD1B-201ENST00000373433 TNIKQ9UKE5 1360 aa16.4■□□□□ 0.22
RPRD1B-201ENST00000373433 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
RPRD1B-201ENST00000373433 CLIP1P30622 1438 aa16.39■□□□□ 0.21
RPRD1B-201ENST00000373433 CUX1P39880 1505 aa16.36■□□□□ 0.21
RPRD1B-201ENST00000373433 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
RPRD1B-201ENST00000373433 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
RPRD1B-201ENST00000373433 ARID3CA6NKF2 412 aa16.32■□□□□ 0.2
RPRD1B-201ENST00000373433 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
RPRD1B-201ENST00000373433 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
RPRD1B-201ENST00000373433 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
RPRD1B-201ENST00000373433 IGF1RP08069 1367 aa16.25■□□□□ 0.19
RPRD1B-201ENST00000373433 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
RPRD1B-201ENST00000373433 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
RPRD1B-201ENST00000373433 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
RPRD1B-201ENST00000373433 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms