RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 PELP1Q8IZL8 1130 aaKnown RBP17.62■□□□□ 0.41
SOD2-216ENST00000546260 HRCP23327 699 aa17.17■□□□□ 0.34
SOD2-216ENST00000546260 MYT1Q01538 1121 aa17.17■□□□□ 0.34
SOD2-216ENST00000546260 PCGF6Q9BYE7 350 aa17.07■□□□□ 0.32
SOD2-216ENST00000546260 PPARGC1BQ86YN6 1023 aaKnown RBP17.02■□□□□ 0.32
SOD2-216ENST00000546260 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
SOD2-216ENST00000546260 NISCHQ9Y2I1 1504 aa16.69■□□□□ 0.26
SOD2-216ENST00000546260 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
SOD2-216ENST00000546260 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
SOD2-216ENST00000546260 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
SOD2-216ENST00000546260 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
SOD2-216ENST00000546260 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
SOD2-216ENST00000546260 ACIN1Q9UKV3 1341 aaKnown RBP16.12■□□□□ 0.17
SOD2-216ENST00000546260 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
SOD2-216ENST00000546260 YTHDC1Q96MU7 727 aaKnown RBP16.09■□□□□ 0.17
SOD2-216ENST00000546260 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
SOD2-216ENST00000546260 NEUROD1Q13562 356 aa16.02■□□□□ 0.15
SOD2-216ENST00000546260 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
SOD2-216ENST00000546260 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
SOD2-216ENST00000546260 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
SOD2-216ENST00000546260 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
SOD2-216ENST00000546260 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
SOD2-216ENST00000546260 BCL11AQ9H165 835 aa15.85■□□□□ 0.13
SOD2-216ENST00000546260 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
SOD2-216ENST00000546260 FAM9AQ8IZU1 332 aaPredicted RBP15.66■□□□□ 0.1
SOD2-216ENST00000546260 MYO15BQ96JP2 1530 aa15.64■□□□□ 0.09
SOD2-216ENST00000546260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
SOD2-216ENST00000546260 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
SOD2-216ENST00000546260 ANP32EQ9BTT0 268 aa15.52■□□□□ 0.08
SOD2-216ENST00000546260 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
SOD2-216ENST00000546260 PRKCSHP14314 528 aaPredicted RBP15.48■□□□□ 0.07
SOD2-216ENST00000546260 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
SOD2-216ENST00000546260 BCANQ96GW7 911 aa15.35■□□□□ 0.05
SOD2-216ENST00000546260 ZNF316A6NFI3 1004 aaPredicted RBP15.26■□□□□ 0.03
SOD2-216ENST00000546260 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
SOD2-216ENST00000546260 NEFLP07196 543 aa15.24■□□□□ 0.03
SOD2-216ENST00000546260 CCDC180Q9P1Z9 1646 aa15.23■□□□□ 0.03
SOD2-216ENST00000546260 MIER1Q8N108 512 aa15.18■□□□□ 0.02
SOD2-216ENST00000546260 TSHZ2Q9NRE2 1034 aa15.08■□□□□ 0.01
SOD2-216ENST00000546260 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
SOD2-216ENST00000546260 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
SOD2-216ENST00000546260 FKBP8Q14318 412 aa14.98□□□□□ -0.01
SOD2-216ENST00000546260 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
SOD2-216ENST00000546260 EIF5BO60841 1220 aaKnown RBP14.91□□□□□ -0.02
SOD2-216ENST00000546260 RTL5Q5HYW3 569 aaPredicted RBP14.91□□□□□ -0.02
SOD2-216ENST00000546260 ITGAEP38570 1179 aa14.9□□□□□ -0.02
SOD2-216ENST00000546260 NBR1Q14596 966 aa14.85□□□□□ -0.03
SOD2-216ENST00000546260 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
SOD2-216ENST00000546260 RBM19Q9Y4C8 960 aaKnown RBP14.84□□□□□ -0.03
SOD2-216ENST00000546260 CCDC136Q96JN2 1154 aa14.83□□□□□ -0.04
SOD2-216ENST00000546260 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
SOD2-216ENST00000546260 CDK11AQ9UQ88 783 aaPredicted RBP14.82□□□□□ -0.04
SOD2-216ENST00000546260 DEKP35659 375 aaKnown RBP14.81□□□□□ -0.04
SOD2-216ENST00000546260 APLP2Q06481 763 aa14.8□□□□□ -0.04
SOD2-216ENST00000546260 MYT1LQ9UL68 1186 aa14.79□□□□□ -0.04
SOD2-216ENST00000546260 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
SOD2-216ENST00000546260 UBTFP17480 764 aaKnown RBP14.69□□□□□ -0.06
SOD2-216ENST00000546260 RANGAP1P46060 587 aaPredicted RBP14.66□□□□□ -0.06
SOD2-216ENST00000546260 SALL2Q9Y467 1007 aaPredicted RBP14.63□□□□□ -0.07
SOD2-216ENST00000546260 TRIM52Q96A61 297 aa14.6□□□□□ -0.07
SOD2-216ENST00000546260 IRX6P78412 446 aaPredicted RBP14.59□□□□□ -0.07
SOD2-216ENST00000546260 ANP32AP39687 249 aaKnown RBP14.49□□□□□ -0.09
SOD2-216ENST00000546260 GLIPR1L2Q4G1C9 344 aa14.45□□□□□ -0.1
SOD2-216ENST00000546260 ERICH6BQ5W0A0 696 aa14.45□□□□□ -0.1
SOD2-216ENST00000546260 MSH5O43196 834 aa14.45□□□□□ -0.1
SOD2-216ENST00000546260 DDX10Q13206 875 aaKnown RBP14.44□□□□□ -0.1
SOD2-216ENST00000546260 NOP58Q9Y2X3 529 aaKnown RBP14.44□□□□□ -0.1
SOD2-216ENST00000546260 NPM2Q86SE8 214 aaKnown RBP14.44□□□□□ -0.1
SOD2-216ENST00000546260 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
SOD2-216ENST00000546260 ANP32CO43423 234 aa14.42□□□□□ -0.1
SOD2-216ENST00000546260 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
SOD2-216ENST00000546260 DAXXQ9UER7 740 aaPredicted RBP14.39□□□□□ -0.11
SOD2-216ENST00000546260 IL27Q8NEV9 243 aa14.38□□□□□ -0.11
SOD2-216ENST00000546260 HNRNPUQ00839 825 aaKnown RBP eCLIP14.35□□□□□ -0.11
SOD2-216ENST00000546260 FANCIQ9NVI1 1328 aa14.34□□□□□ -0.11
SOD2-216ENST00000546260 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.12
SOD2-216ENST00000546260 UBE2Q2Q8WVN8 375 aa14.32□□□□□ -0.12
SOD2-216ENST00000546260 CNGB1Q14028 1251 aaPredicted RBP14.29□□□□□ -0.12
SOD2-216ENST00000546260 LAS1LQ9Y4W2 734 aaKnown RBP14.29□□□□□ -0.12
SOD2-216ENST00000546260 NEFMP07197 916 aa14.29□□□□□ -0.12
SOD2-216ENST00000546260 TIMELESSQ9UNS1 1208 aa14.26□□□□□ -0.13
SOD2-216ENST00000546260 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
SOD2-216ENST00000546260 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
SOD2-216ENST00000546260 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
SOD2-216ENST00000546260 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
SOD2-216ENST00000546260 PAK3O75914 559 aaPredicted RBP14.15□□□□□ -0.14
SOD2-216ENST00000546260 PODXL2Q9NZ53 605 aa14.15□□□□□ -0.14
SOD2-216ENST00000546260 ARXQ96QS3 562 aa14.12□□□□□ -0.15
SOD2-216ENST00000546260 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
SOD2-216ENST00000546260 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
SOD2-216ENST00000546260 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
SOD2-216ENST00000546260 IPO9Q96P70 1041 aaKnown RBP14.08□□□□□ -0.16
SOD2-216ENST00000546260 CEP162Q5TB80 1403 aa14.08□□□□□ -0.16
SOD2-216ENST00000546260 NAP1L5Q96NT1 182 aaPredicted RBP14.07□□□□□ -0.16
SOD2-216ENST00000546260 BRPF3Q9ULD4 1205 aa14.06□□□□□ -0.16
SOD2-216ENST00000546260 POLR3GLQ9BT43 218 aa14.05□□□□□ -0.16
SOD2-216ENST00000546260 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
SOD2-216ENST00000546260 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
SOD2-216ENST00000546260 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
SOD2-216ENST00000546260 ATP1B4Q9UN42 357 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms