RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
CD46-210ENST00000462968 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
CD46-210ENST00000462968 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
CD46-210ENST00000462968 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
CD46-210ENST00000462968 FOXD1Q16676 465 aa14.64□□□□□ -0.07
CD46-210ENST00000462968 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
CD46-210ENST00000462968 MSH5O43196 834 aa13.8□□□□□ -0.2
CD46-210ENST00000462968 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
CD46-210ENST00000462968 PLPPR3Q6T4P5 718 aa13.46□□□□□ -0.25
CD46-210ENST00000462968 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
CD46-210ENST00000462968 ADRA2BP18089 450 aa13.36□□□□□ -0.27
CD46-210ENST00000462968 DMRT2Q9Y5R5 561 aa12.38□□□□□ -0.43
CD46-210ENST00000462968 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
CD46-210ENST00000462968 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
CD46-210ENST00000462968 CACNB1Q02641 598 aaPredicted RBP12.01□□□□□ -0.49
CD46-210ENST00000462968 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
CD46-210ENST00000462968 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
CD46-210ENST00000462968 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
CD46-210ENST00000462968 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
CD46-210ENST00000462968 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
CD46-210ENST00000462968 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
CD46-210ENST00000462968 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
CD46-210ENST00000462968 DNAJC5BQ9UF47 199 aa11.49□□□□□ -0.57
CD46-210ENST00000462968 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
CD46-210ENST00000462968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.18□□□□□ -0.624e-9■■□□□ 11.7
CD46-210ENST00000462968 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
CD46-210ENST00000462968 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.65
CD46-210ENST00000462968 POTEHQ6S545 545 aa10.92□□□□□ -0.66
CD46-210ENST00000462968 DSG3P32926 999 aa10.91□□□□□ -0.66
CD46-210ENST00000462968 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
CD46-210ENST00000462968 CAPN15O75808 1086 aa10.84□□□□□ -0.67
CD46-210ENST00000462968 SLC4A2P04920 1241 aa10.67□□□□□ -0.7
CD46-210ENST00000462968 TRHP20396 242 aaPredicted RBP10.58□□□□□ -0.72
CD46-210ENST00000462968 ZNF219Q9P2Y4 722 aaPredicted RBP10.57□□□□□ -0.72
CD46-210ENST00000462968 ABCB7O75027 752 aa10.56□□□□□ -0.72
CD46-210ENST00000462968 APLP2Q06481 763 aa10.56□□□□□ -0.72
CD46-210ENST00000462968 KCNA4P22459 653 aa10.55□□□□□ -0.72
CD46-210ENST00000462968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.49□□□□□ -0.73
CD46-210ENST00000462968 HNRNPUL2Q1KMD3 747 aaKnown RBP10.49□□□□□ -0.73
CD46-210ENST00000462968 SAMD1Q6SPF0 538 aaPredicted RBP10.43□□□□□ -0.74
CD46-210ENST00000462968 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
CD46-210ENST00000462968 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
CD46-210ENST00000462968 POLA2Q14181 598 aa10.25□□□□□ -0.77
CD46-210ENST00000462968 MYCNP04198 464 aaPredicted RBP10.22□□□□□ -0.77
CD46-210ENST00000462968 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
CD46-210ENST00000462968 AKT1S1Q96B36 256 aa10.09□□□□□ -0.79
CD46-210ENST00000462968 ATF5Q9Y2D1 282 aaPredicted RBP10.03□□□□□ -0.8
CD46-210ENST00000462968 ZBTB12Q9Y330 459 aaPredicted RBP10.01□□□□□ -0.81
CD46-210ENST00000462968 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
CD46-210ENST00000462968 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
CD46-210ENST00000462968 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
CD46-210ENST00000462968 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
CD46-210ENST00000462968 PITPNM1O00562 1244 aa9.9□□□□□ -0.82
CD46-210ENST00000462968 FXR2P51116 673 aaKnown RBP eCLIP9.89□□□□□ -0.83
CD46-210ENST00000462968 SLC4A1APQ9BWU0 796 aaKnown RBP9.87□□□□□ -0.83
CD46-210ENST00000462968 HAX1O00165 279 aa9.85□□□□□ -0.83
CD46-210ENST00000462968 EVX2Q03828 476 aa9.77□□□□□ -0.85
CD46-210ENST00000462968 ZBTB22O15209 634 aa9.72□□□□□ -0.85
CD46-210ENST00000462968 SPDYE2BA6NHP3 402 aa9.7□□□□□ -0.86
CD46-210ENST00000462968 SPDYE6P0CI01 402 aa9.7□□□□□ -0.86
CD46-210ENST00000462968 SPDYE2Q495Y8 402 aa9.7□□□□□ -0.86
CD46-210ENST00000462968 ATXN8OSP0DMR3 200 aa9.68□□□□□ -0.86
CD46-210ENST00000462968 PRKAR2AP13861 404 aaKnown RBP9.62□□□□□ -0.87
CD46-210ENST00000462968 FBLN2P98095 1184 aa9.61□□□□□ -0.87
CD46-210ENST00000462968 C19orf67A6NJJ6 358 aa9.59□□□□□ -0.87
CD46-210ENST00000462968 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
CD46-210ENST00000462968 MKRN4PQ13434 485 aaPredicted RBP9.57□□□□□ -0.88
CD46-210ENST00000462968 SSUH2Q9Y2M2 353 aa9.56□□□□□ -0.88
CD46-210ENST00000462968 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
CD46-210ENST00000462968 GABBR2O75899 941 aa9.51□□□□□ -0.89
CD46-210ENST00000462968 ZNF692Q9BU19 519 aaPredicted RBP9.49□□□□□ -0.89
CD46-210ENST00000462968 LHX8Q68G74 356 aa9.45□□□□□ -0.9
CD46-210ENST00000462968 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
CD46-210ENST00000462968 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
CD46-210ENST00000462968 PABPN1Q86U42 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
CD46-210ENST00000462968 POTEIP0CG38 1075 aa9.33□□□□□ -0.92
CD46-210ENST00000462968 CD44P16070 742 aaKnown RBP9.29□□□□□ -0.92
CD46-210ENST00000462968 FARP1Q9Y4F1 1045 aaPredicted RBP9.28□□□□□ -0.92
CD46-210ENST00000462968 CLCN6P51797 869 aa9.25□□□□□ -0.93
CD46-210ENST00000462968 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
CD46-210ENST00000462968 DCBLD2Q96PD2 775 aa9.14□□□□□ -0.95
CD46-210ENST00000462968 CREBZFQ9NS37 354 aa9.11□□□□□ -0.95
CD46-210ENST00000462968 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
CD46-210ENST00000462968 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
CD46-210ENST00000462968 GALR2O43603 387 aaPredicted RBP9.06□□□□□ -0.96
CD46-210ENST00000462968 OTUD5Q96G74 571 aa9.04□□□□□ -0.96
CD46-210ENST00000462968 STAG3Q9UJ98 1225 aa9.03□□□□□ -0.96
CD46-210ENST00000462968 POTEB2H3BUK9 544 aa9.02□□□□□ -0.97
CD46-210ENST00000462968 PHF12Q96QT6 1004 aa8.97□□□□□ -0.97
CD46-210ENST00000462968 CSRNP3Q8WYN3 585 aa8.96□□□□□ -0.98
CD46-210ENST00000462968 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
CD46-210ENST00000462968 PAK3O75914 559 aaPredicted RBP8.93□□□□□ -0.98
CD46-210ENST00000462968 MNX1P50219 401 aaPredicted RBP8.93□□□□□ -0.98
CD46-210ENST00000462968 POTEMA6NI47 508 aa8.9□□□□□ -0.98
CD46-210ENST00000462968 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
CD46-210ENST00000462968 NPM1P06748 294 aaKnown RBP eCLIP8.88□□□□□ -0.99
CD46-210ENST00000462968 ASTLQ6HA08 431 aaPredicted RBP8.87□□□□□ -0.99
CD46-210ENST00000462968 POTEGQ6S5H5 508 aa8.87□□□□□ -0.99
CD46-210ENST00000462968 POTEJP0CG39 1038 aa8.85□□□□□ -0.99
CD46-210ENST00000462968 MS4A3Q96HJ5 214 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms