RNA–Protein interactions for RNA: ENST00000308234.11

RGMB-201, Transcript of repulsive guidance molecule BMP co-receptor b, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGMB, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMB-201ENST00000308234 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
RGMB-201ENST00000308234 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
RGMB-201ENST00000308234 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.48
RGMB-201ENST00000308234 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
RGMB-201ENST00000308234 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
RGMB-201ENST00000308234 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
RGMB-201ENST00000308234 FAM9AQ8IZU1 332 aaPredicted RBP22.74■■□□□ 1.23
RGMB-201ENST00000308234 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
RGMB-201ENST00000308234 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
RGMB-201ENST00000308234 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
RGMB-201ENST00000308234 APLP2Q06481 763 aa22.23■■□□□ 1.15
RGMB-201ENST00000308234 HRCP23327 699 aa22.21■■□□□ 1.15
RGMB-201ENST00000308234 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
RGMB-201ENST00000308234 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
RGMB-201ENST00000308234 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
RGMB-201ENST00000308234 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
RGMB-201ENST00000308234 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
RGMB-201ENST00000308234 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
RGMB-201ENST00000308234 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
RGMB-201ENST00000308234 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
RGMB-201ENST00000308234 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
RGMB-201ENST00000308234 ABCC9O60706 1549 aa21.72■■□□□ 1.07
RGMB-201ENST00000308234 CENPBP07199 599 aaPredicted RBP21.7■■□□□ 1.06
RGMB-201ENST00000308234 PELP1Q8IZL8 1130 aaKnown RBP21.61■■□□□ 1.05
RGMB-201ENST00000308234 ATP1B4Q9UN42 357 aaPredicted RBP21.41■■□□□ 1.02
RGMB-201ENST00000308234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
RGMB-201ENST00000308234 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
RGMB-201ENST00000308234 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1
RGMB-201ENST00000308234 DCAF1Q9Y4B6 1507 aa21.31■■□□□ 1
RGMB-201ENST00000308234 YTHDC1Q96MU7 727 aaKnown RBP21.3■■□□□ 1
RGMB-201ENST00000308234 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
RGMB-201ENST00000308234 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
RGMB-201ENST00000308234 ITGAEP38570 1179 aa21.11■□□□□ 0.97
RGMB-201ENST00000308234 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
RGMB-201ENST00000308234 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
RGMB-201ENST00000308234 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
RGMB-201ENST00000308234 NEFLP07196 543 aa20.86■□□□□ 0.93
RGMB-201ENST00000308234 NACADO15069 1562 aa20.79■□□□□ 0.92
RGMB-201ENST00000308234 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.91
RGMB-201ENST00000308234 RB1CC1Q8TDY2 1594 aa20.71■□□□□ 0.91
RGMB-201ENST00000308234 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
RGMB-201ENST00000308234 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
RGMB-201ENST00000308234 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
RGMB-201ENST00000308234 MYT1Q01538 1121 aa20.62■□□□□ 0.89
RGMB-201ENST00000308234 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
RGMB-201ENST00000308234 ERICH6Q7L0X2 663 aa20.6■□□□□ 0.89
RGMB-201ENST00000308234 EEA1Q15075 1411 aa20.54■□□□□ 0.88
RGMB-201ENST00000308234 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
RGMB-201ENST00000308234 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.87
RGMB-201ENST00000308234 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
RGMB-201ENST00000308234 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
RGMB-201ENST00000308234 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
RGMB-201ENST00000308234 CLIP1P30622 1438 aa20.45■□□□□ 0.86
RGMB-201ENST00000308234 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
RGMB-201ENST00000308234 GOLGA3Q08378 1498 aa20.42■□□□□ 0.86
RGMB-201ENST00000308234 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
RGMB-201ENST00000308234 POLR3GLQ9BT43 218 aa20.4■□□□□ 0.86
RGMB-201ENST00000308234 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
RGMB-201ENST00000308234 ANP32CO43423 234 aa20.28■□□□□ 0.84
RGMB-201ENST00000308234 CNGB1Q14028 1251 aaPredicted RBP20.28■□□□□ 0.84
RGMB-201ENST00000308234 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
RGMB-201ENST00000308234 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.83
RGMB-201ENST00000308234 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
RGMB-201ENST00000308234 SOGA1O94964 1423 aa20.25■□□□□ 0.83
RGMB-201ENST00000308234 CCDC88BA6NC98 1476 aa20.22■□□□□ 0.83
RGMB-201ENST00000308234 WIZO95785 1651 aa20.18■□□□□ 0.82
RGMB-201ENST00000308234 MIER1Q8N108 512 aa20.16■□□□□ 0.82
RGMB-201ENST00000308234 BCANQ96GW7 911 aa20.16■□□□□ 0.82
RGMB-201ENST00000308234 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
RGMB-201ENST00000308234 ARID3CA6NKF2 412 aa20.1■□□□□ 0.81
RGMB-201ENST00000308234 MYT1LQ9UL68 1186 aa20.09■□□□□ 0.81
RGMB-201ENST00000308234 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
RGMB-201ENST00000308234 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
RGMB-201ENST00000308234 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
RGMB-201ENST00000308234 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
RGMB-201ENST00000308234 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
RGMB-201ENST00000308234 FBLN2P98095 1184 aa20.04■□□□□ 0.8
RGMB-201ENST00000308234 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
RGMB-201ENST00000308234 CDK11AQ9UQ88 783 aaPredicted RBP19.97■□□□□ 0.79
RGMB-201ENST00000308234 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
RGMB-201ENST00000308234 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
RGMB-201ENST00000308234 ZNF777Q9ULD5 760 aaPredicted RBP19.89■□□□□ 0.78
RGMB-201ENST00000308234 CHIC2Q9UKJ5 165 aa19.89■□□□□ 0.77
RGMB-201ENST00000308234 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
RGMB-201ENST00000308234 FKBP8Q14318 412 aa19.87■□□□□ 0.77
RGMB-201ENST00000308234 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
RGMB-201ENST00000308234 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.76
RGMB-201ENST00000308234 HIRIP3Q9BW71 556 aaPredicted RBP19.82■□□□□ 0.76
RGMB-201ENST00000308234 DAXXQ9UER7 740 aaPredicted RBP19.8■□□□□ 0.76
RGMB-201ENST00000308234 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
RGMB-201ENST00000308234 RUSC2Q8N2Y8 1516 aa19.79■□□□□ 0.76
RGMB-201ENST00000308234 KANK4Q5T7N3 995 aaPredicted RBP19.78■□□□□ 0.76
RGMB-201ENST00000308234 CUX2O14529 1486 aa19.78■□□□□ 0.76
RGMB-201ENST00000308234 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
RGMB-201ENST00000308234 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
RGMB-201ENST00000308234 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
RGMB-201ENST00000308234 FHAD1B1AJZ9 1412 aa19.72■□□□□ 0.75
RGMB-201ENST00000308234 SIN3AQ96ST3 1273 aa19.71■□□□□ 0.75
RGMB-201ENST00000308234 RAPGEF2Q9Y4G8 1499 aa19.7■□□□□ 0.74
RGMB-201ENST00000308234 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms