Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 AC066615.1-201ENST00000640911 628 ntBASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP40Q96DI7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 AC007322.1-201ENST00000426983 750 ntBASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 DUX4L16-201ENST00000555130 1264 ntBASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 KRT18P6-201ENST00000555540 1265 ntBASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 AC005224.4-201ENST00000583262 1652 ntBASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP40Q96DI7 KRT87P-202ENST00000534226 1464 ntBASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 AC005181.1-201ENST00000604782 1256 ntBASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 AC020928.2-201ENST00000588717 2197 ntBASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP40Q96DI7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 SLC7A5P2-201ENST00000553010 536 ntBASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP40Q96DI7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 GUSBP6-202ENST00000438529 1198 ntBASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 UBE2DNL-204ENST00000602536 740 ntBASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 AC009237.3-201ENST00000393279 1427 ntBASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
SNRNP40Q96DI7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 AL138781.1-201ENST00000566567 1274 ntBASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP40Q96DI7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP40Q96DI7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms