Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD4Q5XG99 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.53■■□□□ 1.04
LYSMD4Q5XG99 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.53■■□□□ 1.04
LYSMD4Q5XG99 SLC7A5P2-201ENST00000553010 536 ntBASIC21.53■■□□□ 1.04
LYSMD4Q5XG99 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.53■■□□□ 1.04
LYSMD4Q5XG99 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.53■■□□□ 1.04
LYSMD4Q5XG99 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.53■■□□□ 1.04
LYSMD4Q5XG99 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD4Q5XG99 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD4Q5XG99 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 GUSBP6-202ENST00000438529 1198 ntBASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 MYCNOS-205ENST00000641950 531 ntBASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LYSMD4Q5XG99 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
LYSMD4Q5XG99 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LYSMD4Q5XG99 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.52■■□□□ 1.03
LYSMD4Q5XG99 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 AC066615.1-201ENST00000640911 628 ntBASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD4Q5XG99 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 LINC00543-201ENST00000567234 1845 ntBASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 AL138781.1-201ENST00000566567 1274 ntBASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 AP001160.3-201ENST00000601484 763 ntBASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.5■■□□□ 1.03
LYSMD4Q5XG99 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD4Q5XG99 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 DUSP8P3-201ENST00000399571 1760 ntBASIC21.48■■□□□ 1.03
LYSMD4Q5XG99 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 LINC01124-201ENST00000409786 2117 ntBASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms