Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF888P0CJ79 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ZNF888P0CJ79 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF888P0CJ79 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 OXCT2P1-201ENST00000447263 1535 ntBASIC20.68■□□□□ 0.9
ZNF888P0CJ79 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF888P0CJ79 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF888P0CJ79 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 AC080038.3-201ENST00000623346 1952 ntBASIC20.66■□□□□ 0.9
ZNF888P0CJ79 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 AC079089.2-201ENST00000531211 1277 ntBASIC20.66■□□□□ 0.9
ZNF888P0CJ79 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ZNF888P0CJ79 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF888P0CJ79 GUSBP5-202ENST00000510805 1989 ntBASIC20.65■□□□□ 0.9
ZNF888P0CJ79 AC139530.1-201ENST00000575312 1977 ntBASIC20.65■□□□□ 0.9
ZNF888P0CJ79 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.64■□□□□ 0.9
ZNF888P0CJ79 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF888P0CJ79 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.64■□□□□ 0.9
ZNF888P0CJ79 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF888P0CJ79 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF888P0CJ79 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF888P0CJ79 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF888P0CJ79 AC019069.1-201ENST00000610008 1333 ntBASIC20.62■□□□□ 0.89
ZNF888P0CJ79 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF888P0CJ79 MIR572-201ENST00000384983 95 ntBASIC20.62■□□□□ 0.89
ZNF888P0CJ79 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF888P0CJ79 ZNRF2P3-201ENST00000424200 374 ntBASIC20.62■□□□□ 0.89
ZNF888P0CJ79 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF888P0CJ79 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF888P0CJ79 LINC00526-201ENST00000581067 1875 ntBASIC20.62■□□□□ 0.89
ZNF888P0CJ79 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF888P0CJ79 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms