Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
EDF1O60869 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.5■■□□□ 1.03
EDF1O60869 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
EDF1O60869 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
EDF1O60869 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.5■■□□□ 1.03
EDF1O60869 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EDF1O60869 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EDF1O60869 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.49■■□□□ 1.03
EDF1O60869 RNF126P1-201ENST00000567452 1320 ntBASIC21.49■■□□□ 1.03
EDF1O60869 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.49■■□□□ 1.03
EDF1O60869 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.48■■□□□ 1.03
EDF1O60869 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
EDF1O60869 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.48■■□□□ 1.03
EDF1O60869 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.48■■□□□ 1.03
EDF1O60869 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
EDF1O60869 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
EDF1O60869 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EDF1O60869 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
EDF1O60869 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
EDF1O60869 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EDF1O60869 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EDF1O60869 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
EDF1O60869 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.47■■□□□ 1.03
EDF1O60869 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EDF1O60869 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
EDF1O60869 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EDF1O60869 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
EDF1O60869 MIR4281-201ENST00000580852 62 ntBASIC21.47■■□□□ 1.03
EDF1O60869 CA15P2-201ENST00000611168 834 ntBASIC21.47■■□□□ 1.03
EDF1O60869 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
EDF1O60869 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EDF1O60869 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
EDF1O60869 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EDF1O60869 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.46■■□□□ 1.03
EDF1O60869 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
EDF1O60869 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.46■■□□□ 1.03
EDF1O60869 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.46■■□□□ 1.03
EDF1O60869 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EDF1O60869 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.46■■□□□ 1.03
EDF1O60869 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.45■■□□□ 1.02
EDF1O60869 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.45■■□□□ 1.02
EDF1O60869 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
EDF1O60869 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EDF1O60869 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EDF1O60869 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
EDF1O60869 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.45■■□□□ 1.02
EDF1O60869 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.45■■□□□ 1.02
EDF1O60869 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EDF1O60869 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.45■■□□□ 1.02
EDF1O60869 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EDF1O60869 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EDF1O60869 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
EDF1O60869 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EDF1O60869 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EDF1O60869 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EDF1O60869 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
EDF1O60869 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EDF1O60869 FP325331.1-202ENST00000623531 1380 ntBASIC21.44■■□□□ 1.02
EDF1O60869 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
EDF1O60869 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
EDF1O60869 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.43■■□□□ 1.02
EDF1O60869 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EDF1O60869 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EDF1O60869 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.43■■□□□ 1.02
EDF1O60869 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.43■■□□□ 1.02
EDF1O60869 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
EDF1O60869 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.43■■□□□ 1.02
EDF1O60869 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
EDF1O60869 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.43■■□□□ 1.02
EDF1O60869 AC129492.7-201ENST00000622992 756 ntBASIC21.43■■□□□ 1.02
EDF1O60869 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.43■■□□□ 1.02
EDF1O60869 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.43■■□□□ 1.02
EDF1O60869 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EDF1O60869 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.43■■□□□ 1.02
EDF1O60869 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EDF1O60869 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EDF1O60869 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EDF1O60869 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EDF1O60869 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms