Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMCO3A2RU48 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMCO3A2RU48 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMCO3A2RU48 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.67■□□□□ 0.42
SMCO3A2RU48 AC092053.2-201ENST00000640557 1818 ntBASIC17.67■□□□□ 0.42
SMCO3A2RU48 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SMCO3A2RU48 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SMCO3A2RU48 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.67■□□□□ 0.42
SMCO3A2RU48 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO3A2RU48 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 AL353803.4-201ENST00000565882 1934 ntBASIC17.66■□□□□ 0.42
SMCO3A2RU48 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO3A2RU48 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO3A2RU48 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO3A2RU48 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO3A2RU48 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO3A2RU48 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.66■□□□□ 0.42
SMCO3A2RU48 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO3A2RU48 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO3A2RU48 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 C11orf96-202ENST00000528572 1834 ntBASIC17.65■□□□□ 0.42
SMCO3A2RU48 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SMCO3A2RU48 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.65■□□□□ 0.42
SMCO3A2RU48 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.65■□□□□ 0.42
SMCO3A2RU48 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.65■□□□□ 0.42
SMCO3A2RU48 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMCO3A2RU48 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO3A2RU48 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMCO3A2RU48 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMCO3A2RU48 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMCO3A2RU48 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SMCO3A2RU48 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMCO3A2RU48 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.64■□□□□ 0.41
SMCO3A2RU48 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.64■□□□□ 0.41
SMCO3A2RU48 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMCO3A2RU48 AC139795.1-202ENST00000500444 432 ntBASIC17.64■□□□□ 0.41
SMCO3A2RU48 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMCO3A2RU48 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO3A2RU48 FBXW4P1-201ENST00000426721 2239 ntBASIC17.64■□□□□ 0.41
SMCO3A2RU48 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.64■□□□□ 0.41
SMCO3A2RU48 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMCO3A2RU48 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO3A2RU48 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO3A2RU48 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO3A2RU48 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO3A2RU48 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO3A2RU48 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SMCO3A2RU48 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms