Protein–RNA interactions for Protein: A0A0B4J1U7

IGHV6-1, Immunoglobulin heavy variable 6-1, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV6-1A0A0B4J1U7 MIR7108-201ENST00000614319 87 ntBASIC12.66□□□□□ -0.38
IGHV6-1A0A0B4J1U7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IGHV6-1A0A0B4J1U7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IGHV6-1A0A0B4J1U7 AC090340.1-201ENST00000620778 4980 ntBASIC12.66□□□□□ -0.38
IGHV6-1A0A0B4J1U7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
IGHV6-1A0A0B4J1U7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
IGHV6-1A0A0B4J1U7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IGHV6-1A0A0B4J1U7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
IGHV6-1A0A0B4J1U7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC12.65□□□□□ -0.38
IGHV6-1A0A0B4J1U7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 AC131274.2-201ENST00000580697 1507 ntBASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 AC087393.1-201ENST00000582896 145 ntBASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV6-1A0A0B4J1U7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
IGHV6-1A0A0B4J1U7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
IGHV6-1A0A0B4J1U7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms