RNA–Protein interactions for RNA: ENST00000265361.7

SEMA3C-201, Transcript of semaphorin 3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3C, Length 5,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-201ENST00000265361 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
SEMA3C-201ENST00000265361 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
SEMA3C-201ENST00000265361 SUPT5HO00267 1087 aaKnown RBP28.65■■■□□ 2.18
SEMA3C-201ENST00000265361 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
SEMA3C-201ENST00000265361 PELP1Q8IZL8 1130 aaKnown RBP28.06■■■□□ 2.08
SEMA3C-201ENST00000265361 EHMT2Q96KQ7 1210 aa28.01■■■□□ 2.07
SEMA3C-201ENST00000265361 APLP2Q06481 763 aa27.72■■■□□ 2.03
SEMA3C-201ENST00000265361 FAM9AQ8IZU1 332 aaPredicted RBP27.38■■□□□ 1.97
SEMA3C-201ENST00000265361 PCGF6Q9BYE7 350 aa27.1■■□□□ 1.93
SEMA3C-201ENST00000265361 TTBK1Q5TCY1 1321 aaPredicted RBP27.08■■□□□ 1.93
SEMA3C-201ENST00000265361 ERICH6Q7L0X2 663 aa26.9■■□□□ 1.9
SEMA3C-201ENST00000265361 CCER1Q8TC90 406 aaPredicted RBP26.82■■□□□ 1.88
SEMA3C-201ENST00000265361 RANGAP1P46060 587 aaPredicted RBP26.8■■□□□ 1.88
SEMA3C-201ENST00000265361 CENPBP07199 599 aaPredicted RBP26.76■■□□□ 1.87
SEMA3C-201ENST00000265361 ATP1B4Q9UN42 357 aaPredicted RBP26.69■■□□□ 1.86
SEMA3C-201ENST00000265361 ZEB1P37275 1124 aaPredicted RBP26.53■■□□□ 1.84
SEMA3C-201ENST00000265361 HRCP23327 699 aa26.49■■□□□ 1.83
SEMA3C-201ENST00000265361 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
SEMA3C-201ENST00000265361 NEFLP07196 543 aa26.38■■□□□ 1.81
SEMA3C-201ENST00000265361 UBTFP17480 764 aaKnown RBP26.38■■□□□ 1.81
SEMA3C-201ENST00000265361 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
SEMA3C-201ENST00000265361 YTHDC1Q96MU7 727 aaKnown RBP26.13■■□□□ 1.77
SEMA3C-201ENST00000265361 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
SEMA3C-201ENST00000265361 MYT1Q01538 1121 aa25.92■■□□□ 1.74
SEMA3C-201ENST00000265361 LOC105371045A0A1W2PR82 267 aa25.87■■□□□ 1.73
SEMA3C-201ENST00000265361 MYT1LQ9UL68 1186 aa25.85■■□□□ 1.73
SEMA3C-201ENST00000265361 DAXXQ9UER7 740 aaPredicted RBP25.81■■□□□ 1.72
SEMA3C-201ENST00000265361 TRIM26Q12899 539 aaPredicted RBP25.78■■□□□ 1.72
SEMA3C-201ENST00000265361 POLR3GLQ9BT43 218 aa25.74■■□□□ 1.71
SEMA3C-201ENST00000265361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
SEMA3C-201ENST00000265361 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
SEMA3C-201ENST00000265361 ITGAEP38570 1179 aa25.66■■□□□ 1.7
SEMA3C-201ENST00000265361 ZCCHC6Q5VYS8 1495 aaKnown RBP25.48■■□□□ 1.67
SEMA3C-201ENST00000265361 CNGB1Q14028 1251 aaPredicted RBP25.47■■□□□ 1.67
SEMA3C-201ENST00000265361 SLC4A1APQ9BWU0 796 aaKnown RBP25.35■■□□□ 1.65
SEMA3C-201ENST00000265361 CLSPNQ9HAW4 1339 aa25.21■■□□□ 1.63
SEMA3C-201ENST00000265361 ABCC9O60706 1549 aa25.2■■□□□ 1.62
SEMA3C-201ENST00000265361 ZNF316A6NFI3 1004 aaPredicted RBP25.11■■□□□ 1.61
SEMA3C-201ENST00000265361 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
SEMA3C-201ENST00000265361 RTL5Q5HYW3 569 aaPredicted RBP25.07■■□□□ 1.6
SEMA3C-201ENST00000265361 GTF3C3Q9Y5Q9 886 aa25.06■■□□□ 1.6
SEMA3C-201ENST00000265361 DIEXFQ68CQ4 756 aaKnown RBP25.02■■□□□ 1.6
SEMA3C-201ENST00000265361 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
SEMA3C-201ENST00000265361 FAM50AQ14320 339 aaKnown RBP24.89■■□□□ 1.58
SEMA3C-201ENST00000265361 TRIM52Q96A61 297 aa24.88■■□□□ 1.57
SEMA3C-201ENST00000265361 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
SEMA3C-201ENST00000265361 ACIN1Q9UKV3 1341 aaKnown RBP24.82■■□□□ 1.56
SEMA3C-201ENST00000265361 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
SEMA3C-201ENST00000265361 ZBTB47Q9UFB7 747 aaPredicted RBP24.76■■□□□ 1.55
SEMA3C-201ENST00000265361 SCAF1Q9H7N4 1312 aaKnown RBP24.74■■□□□ 1.55
SEMA3C-201ENST00000265361 NEUROD1Q13562 356 aa24.71■■□□□ 1.55
SEMA3C-201ENST00000265361 ZNF326Q5BKZ1 582 aaKnown RBP24.66■■□□□ 1.54
SEMA3C-201ENST00000265361 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
SEMA3C-201ENST00000265361 SLC24A1O60721 1099 aa24.57■■□□□ 1.52
SEMA3C-201ENST00000265361 ANP32CO43423 234 aa24.56■■□□□ 1.52
SEMA3C-201ENST00000265361 BCANQ96GW7 911 aa24.56■■□□□ 1.52
SEMA3C-201ENST00000265361 BCL11AQ9H165 835 aa24.5■■□□□ 1.51
SEMA3C-201ENST00000265361 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
SEMA3C-201ENST00000265361 CANXP27824 592 aaKnown RBP24.48■■□□□ 1.51
SEMA3C-201ENST00000265361 NEFMP07197 916 aa24.47■■□□□ 1.51
SEMA3C-201ENST00000265361 FBLN2P98095 1184 aa24.46■■□□□ 1.51
SEMA3C-201ENST00000265361 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
SEMA3C-201ENST00000265361 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
SEMA3C-201ENST00000265361 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
SEMA3C-201ENST00000265361 ANP32AP39687 249 aaKnown RBP24.13■■□□□ 1.45
SEMA3C-201ENST00000265361 P3H3Q8IVL6 736 aa24.12■■□□□ 1.45
SEMA3C-201ENST00000265361 ZNF777Q9ULD5 760 aaPredicted RBP24.11■■□□□ 1.45
SEMA3C-201ENST00000265361 ESF1Q9H501 851 aaKnown RBP24.08■■□□□ 1.45
SEMA3C-201ENST00000265361 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
SEMA3C-201ENST00000265361 NPM2Q86SE8 214 aaKnown RBP24.02■■□□□ 1.44
SEMA3C-201ENST00000265361 HSP90AA1P07900 732 aaKnown RBP23.97■■□□□ 1.43
SEMA3C-201ENST00000265361 ANP32BQ92688 251 aaKnown RBP23.97■■□□□ 1.43
SEMA3C-201ENST00000265361 STAG3Q9UJ98 1225 aa23.95■■□□□ 1.42
SEMA3C-201ENST00000265361 CHGAP10645 457 aaKnown RBP23.94■■□□□ 1.42
SEMA3C-201ENST00000265361 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
SEMA3C-201ENST00000265361 NACADO15069 1562 aa23.92■■□□□ 1.42
SEMA3C-201ENST00000265361 UPF2Q9HAU5 1272 aaKnown RBP23.87■■□□□ 1.41
SEMA3C-201ENST00000265361 MIER1Q8N108 512 aa23.84■■□□□ 1.41
SEMA3C-201ENST00000265361 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
SEMA3C-201ENST00000265361 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
SEMA3C-201ENST00000265361 TONSLQ96HA7 1378 aa23.77■■□□□ 1.4
SEMA3C-201ENST00000265361 EIF5BO60841 1220 aaKnown RBP23.77■■□□□ 1.4
SEMA3C-201ENST00000265361 NPM1P06748 294 aaKnown RBP eCLIP23.76■■□□□ 1.39
SEMA3C-201ENST00000265361 HNRNPUQ00839 825 aaKnown RBP eCLIP23.75■■□□□ 1.39
SEMA3C-201ENST00000265361 FKBP8Q14318 412 aa23.75■■□□□ 1.39
SEMA3C-201ENST00000265361 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
SEMA3C-201ENST00000265361 FAM9BQ8IZU0 186 aa23.72■■□□□ 1.39
SEMA3C-201ENST00000265361 SALL2Q9Y467 1007 aaPredicted RBP23.71■■□□□ 1.39
SEMA3C-201ENST00000265361 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.67■■□□□ 1.38
SEMA3C-201ENST00000265361 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
SEMA3C-201ENST00000265361 DDX10Q13206 875 aaKnown RBP23.63■■□□□ 1.37
SEMA3C-201ENST00000265361 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
SEMA3C-201ENST00000265361 CLIP1P30622 1438 aa23.61■■□□□ 1.37
SEMA3C-201ENST00000265361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.37
SEMA3C-201ENST00000265361 CCDC136Q96JN2 1154 aa23.58■■□□□ 1.37
SEMA3C-201ENST00000265361 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.37
SEMA3C-201ENST00000265361 SOGA1O94964 1423 aa23.56■■□□□ 1.36
SEMA3C-201ENST00000265361 WDR43Q15061 677 aaKnown RBP eCLIP23.56■■□□□ 1.36
SEMA3C-201ENST00000265361 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
SEMA3C-201ENST00000265361 TNIKQ9UKE5 1360 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms