RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
CHRNA4-201ENST00000370263 SUPT5HO00267 1087 aaKnown RBP29.32■■■□□ 2.28
CHRNA4-201ENST00000370263 PELP1Q8IZL8 1130 aaKnown RBP28.91■■■□□ 2.22
CHRNA4-201ENST00000370263 NISCHQ9Y2I1 1504 aa28.8■■■□□ 2.2
CHRNA4-201ENST00000370263 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
CHRNA4-201ENST00000370263 PCGF6Q9BYE7 350 aa28.3■■■□□ 2.12
CHRNA4-201ENST00000370263 EHMT2Q96KQ7 1210 aa28.21■■■□□ 2.11
CHRNA4-201ENST00000370263 MYT1Q01538 1121 aa28.12■■■□□ 2.09
CHRNA4-201ENST00000370263 CENPBP07199 599 aaPredicted RBP28.07■■■□□ 2.08
CHRNA4-201ENST00000370263 ZEB1P37275 1124 aaPredicted RBP27.98■■■□□ 2.07
CHRNA4-201ENST00000370263 APLP2Q06481 763 aa27.78■■■□□ 2.04
CHRNA4-201ENST00000370263 ERICH6Q7L0X2 663 aa27.67■■■□□ 2.02
CHRNA4-201ENST00000370263 FAM9AQ8IZU1 332 aaPredicted RBP27.61■■■□□ 2.01
CHRNA4-201ENST00000370263 CCER1Q8TC90 406 aaPredicted RBP27.54■■■□□ 2
CHRNA4-201ENST00000370263 TTBK1Q5TCY1 1321 aaPredicted RBP27.44■■□□□ 1.98
CHRNA4-201ENST00000370263 HRCP23327 699 aa27.35■■□□□ 1.97
CHRNA4-201ENST00000370263 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
CHRNA4-201ENST00000370263 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
CHRNA4-201ENST00000370263 NEFLP07196 543 aa27.12■■□□□ 1.93
CHRNA4-201ENST00000370263 TRIM26Q12899 539 aaPredicted RBP27.05■■□□□ 1.92
CHRNA4-201ENST00000370263 RANGAP1P46060 587 aaPredicted RBP26.74■■□□□ 1.87
CHRNA4-201ENST00000370263 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
CHRNA4-201ENST00000370263 PPARGC1BQ86YN6 1023 aaKnown RBP26.65■■□□□ 1.86
CHRNA4-201ENST00000370263 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
CHRNA4-201ENST00000370263 ATP1B4Q9UN42 357 aaPredicted RBP26.39■■□□□ 1.82
CHRNA4-201ENST00000370263 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
CHRNA4-201ENST00000370263 DIEXFQ68CQ4 756 aaKnown RBP26.3■■□□□ 1.8
CHRNA4-201ENST00000370263 DAXXQ9UER7 740 aaPredicted RBP26.23■■□□□ 1.79
CHRNA4-201ENST00000370263 GTF3C3Q9Y5Q9 886 aa26.13■■□□□ 1.77
CHRNA4-201ENST00000370263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.08■■□□□ 1.77
CHRNA4-201ENST00000370263 HNRNPUL2Q1KMD3 747 aaKnown RBP26.04■■□□□ 1.76
CHRNA4-201ENST00000370263 RTL5Q5HYW3 569 aaPredicted RBP26.03■■□□□ 1.76
CHRNA4-201ENST00000370263 ITGAEP38570 1179 aa25.91■■□□□ 1.74
CHRNA4-201ENST00000370263 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
CHRNA4-201ENST00000370263 POLR3GLQ9BT43 218 aa25.75■■□□□ 1.71
CHRNA4-201ENST00000370263 BCANQ96GW7 911 aa25.68■■□□□ 1.7
CHRNA4-201ENST00000370263 ZNF316A6NFI3 1004 aaPredicted RBP25.67■■□□□ 1.7
CHRNA4-201ENST00000370263 CDK11AQ9UQ88 783 aaPredicted RBP25.57■■□□□ 1.68
CHRNA4-201ENST00000370263 CNGB1Q14028 1251 aaPredicted RBP25.56■■□□□ 1.68
CHRNA4-201ENST00000370263 CLSPNQ9HAW4 1339 aa25.45■■□□□ 1.66
CHRNA4-201ENST00000370263 ANP32CO43423 234 aa25.38■■□□□ 1.65
CHRNA4-201ENST00000370263 NEUROD1Q13562 356 aa25.26■■□□□ 1.63
CHRNA4-201ENST00000370263 FAM50AQ14320 339 aaKnown RBP25.21■■□□□ 1.63
CHRNA4-201ENST00000370263 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
CHRNA4-201ENST00000370263 ANP32AP39687 249 aaKnown RBP25.15■■□□□ 1.62
CHRNA4-201ENST00000370263 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
CHRNA4-201ENST00000370263 MYT1LQ9UL68 1186 aa25.06■■□□□ 1.6
CHRNA4-201ENST00000370263 FKBP8Q14318 412 aa25.04■■□□□ 1.6
CHRNA4-201ENST00000370263 TRIM52Q96A61 297 aa25.03■■□□□ 1.6
CHRNA4-201ENST00000370263 EIF5BO60841 1220 aaKnown RBP24.96■■□□□ 1.59
CHRNA4-201ENST00000370263 SLC4A1APQ9BWU0 796 aaKnown RBP24.94■■□□□ 1.58
CHRNA4-201ENST00000370263 NPM2Q86SE8 214 aaKnown RBP24.85■■□□□ 1.57
CHRNA4-201ENST00000370263 ZNF326Q5BKZ1 582 aaKnown RBP24.77■■□□□ 1.56
CHRNA4-201ENST00000370263 GLIPR1L2Q4G1C9 344 aa24.75■■□□□ 1.55
CHRNA4-201ENST00000370263 CANXP27824 592 aaKnown RBP24.69■■□□□ 1.54
CHRNA4-201ENST00000370263 ZBTB47Q9UFB7 747 aaPredicted RBP24.69■■□□□ 1.54
CHRNA4-201ENST00000370263 HNRNPUQ00839 825 aaKnown RBP eCLIP24.68■■□□□ 1.54
CHRNA4-201ENST00000370263 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
CHRNA4-201ENST00000370263 NBR1Q14596 966 aa24.65■■□□□ 1.54
CHRNA4-201ENST00000370263 MIER1Q8N108 512 aa24.64■■□□□ 1.54
CHRNA4-201ENST00000370263 ANP32EQ9BTT0 268 aa24.61■■□□□ 1.53
CHRNA4-201ENST00000370263 DDX10Q13206 875 aaKnown RBP24.61■■□□□ 1.53
CHRNA4-201ENST00000370263 ANP32BQ92688 251 aaKnown RBP24.56■■□□□ 1.52
CHRNA4-201ENST00000370263 CCDC136Q96JN2 1154 aa24.5■■□□□ 1.51
CHRNA4-201ENST00000370263 TONSLQ96HA7 1378 aa24.48■■□□□ 1.51
CHRNA4-201ENST00000370263 FAM9BQ8IZU0 186 aa24.47■■□□□ 1.51
CHRNA4-201ENST00000370263 UPF2Q9HAU5 1272 aaKnown RBP24.42■■□□□ 1.5
CHRNA4-201ENST00000370263 BCL11AQ9H165 835 aa24.36■■□□□ 1.49
CHRNA4-201ENST00000370263 HSP90AA1P07900 732 aaKnown RBP24.34■■□□□ 1.49
CHRNA4-201ENST00000370263 IRX6P78412 446 aaPredicted RBP24.3■■□□□ 1.48
CHRNA4-201ENST00000370263 NEFMP07197 916 aa24.28■■□□□ 1.48
CHRNA4-201ENST00000370263 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
CHRNA4-201ENST00000370263 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
CHRNA4-201ENST00000370263 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
CHRNA4-201ENST00000370263 MRS2Q9HD23 443 aa24.24■■□□□ 1.47
CHRNA4-201ENST00000370263 TMC1Q8TDI8 760 aa24.21■■□□□ 1.47
CHRNA4-201ENST00000370263 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.18■■□□□ 1.46
CHRNA4-201ENST00000370263 SALL2Q9Y467 1007 aaPredicted RBP24.18■■□□□ 1.46
CHRNA4-201ENST00000370263 ARXQ96QS3 562 aa24.17■■□□□ 1.46
CHRNA4-201ENST00000370263 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
CHRNA4-201ENST00000370263 DDRGK1Q96HY6 314 aa24.15■■□□□ 1.46
CHRNA4-201ENST00000370263 SUPT16HQ9Y5B9 1047 aaKnown RBP24.11■■□□□ 1.45
CHRNA4-201ENST00000370263 HIRIP3Q9BW71 556 aaPredicted RBP24.03■■□□□ 1.44
CHRNA4-201ENST00000370263 PPM1GO15355 546 aaPredicted RBP24.02■■□□□ 1.44
CHRNA4-201ENST00000370263 ARID3CA6NKF2 412 aa24.02■■□□□ 1.44
CHRNA4-201ENST00000370263 SLC24A1O60721 1099 aa24■■□□□ 1.43
CHRNA4-201ENST00000370263 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
CHRNA4-201ENST00000370263 ABCC9O60706 1549 aa23.99■■□□□ 1.43
CHRNA4-201ENST00000370263 BECN1Q14457 450 aa23.98■■□□□ 1.43
CHRNA4-201ENST00000370263 ERICH6BQ5W0A0 696 aa23.97■■□□□ 1.43
CHRNA4-201ENST00000370263 TRIM44Q96DX7 344 aaPredicted RBP23.96■■□□□ 1.43
CHRNA4-201ENST00000370263 NOP58Q9Y2X3 529 aaKnown RBP23.96■■□□□ 1.43
CHRNA4-201ENST00000370263 EIF4G2P78344 907 aaKnown RBP eCLIP23.95■■□□□ 1.42
CHRNA4-201ENST00000370263 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
CHRNA4-201ENST00000370263 WDR43Q15061 677 aaKnown RBP eCLIP23.94■■□□□ 1.42
CHRNA4-201ENST00000370263 PPP4R2Q9NY27 417 aa23.94■■□□□ 1.42
CHRNA4-201ENST00000370263 RTN4Q9NQC3 1192 aaKnown RBP23.9■■□□□ 1.42
CHRNA4-201ENST00000370263 CLIP1P30622 1438 aa23.9■■□□□ 1.42
CHRNA4-201ENST00000370263 CHIC2Q9UKJ5 165 aa23.85■■□□□ 1.41
CHRNA4-201ENST00000370263 CEP162Q5TB80 1403 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms