Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2A1LQ9UNN4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF2A1LQ9UNN4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.46■□□□□ 0.71
GTF2A1LQ9UNN4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 AC137630.3-201ENST00000607245 391 ntBASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 AC005703.6-201ENST00000623265 1329 ntBASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1LQ9UNN4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 BX664725.1-201ENST00000438252 379 ntBASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GTF2A1LQ9UNN4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GTF2A1LQ9UNN4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1LQ9UNN4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1LQ9UNN4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1LQ9UNN4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1LQ9UNN4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1LQ9UNN4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
GTF2A1LQ9UNN4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1LQ9UNN4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1LQ9UNN4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GTF2A1LQ9UNN4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GTF2A1LQ9UNN4 LINC01529-204ENST00000636474 1715 ntBASIC19.39■□□□□ 0.7
GTF2A1LQ9UNN4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
GTF2A1LQ9UNN4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GTF2A1LQ9UNN4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
GTF2A1LQ9UNN4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF2A1LQ9UNN4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.39■□□□□ 0.69
GTF2A1LQ9UNN4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GTF2A1LQ9UNN4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GTF2A1LQ9UNN4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF2A1LQ9UNN4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms