Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 AC087239.1-201ENST00000622671 572 ntBASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 TMEM191A-211ENST00000637163 1067 ntBASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.83■□□□□ 0.77
SNRNP40Q96DI7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP40Q96DI7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP40Q96DI7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP40Q96DI7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SNRNP40Q96DI7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP40Q96DI7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP40Q96DI7 AC010141.3-201ENST00000456659 717 ntBASIC19.83■□□□□ 0.77
SNRNP40Q96DI7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNRNP40Q96DI7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SNRNP40Q96DI7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
SNRNP40Q96DI7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SNRNP40Q96DI7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SNRNP40Q96DI7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 AC079140.4-201ENST00000507448 529 ntBASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP40Q96DI7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SNRNP40Q96DI7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP40Q96DI7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 CD99P1-205ENST00000527459 561 ntBASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.79■□□□□ 0.76
SNRNP40Q96DI7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 AC138932.3-201ENST00000567634 1902 ntBASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP40Q96DI7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 AC079630.1-202ENST00000618127 1840 ntBASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP40Q96DI7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms