Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 ZNRF2P3-201ENST00000424200 374 ntBASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 TSPY26P-201ENST00000476365 1326 ntBASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LINC01555Q8NAE3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC01555Q8NAE3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC01555Q8NAE3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LINC01555Q8NAE3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC01555Q8NAE3 AC068587.7-201ENST00000641602 218 ntBASIC21.16■□□□□ 0.98
LINC01555Q8NAE3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC01555Q8NAE3 AC068473.5-201ENST00000616428 2072 ntBASIC21.16■□□□□ 0.98
LINC01555Q8NAE3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01555Q8NAE3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LINC01555Q8NAE3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LINC01555Q8NAE3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LINC01555Q8NAE3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LINC01555Q8NAE3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LINC01555Q8NAE3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LINC01555Q8NAE3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.13■□□□□ 0.97
LINC01555Q8NAE3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.13■□□□□ 0.97
LINC01555Q8NAE3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC01555Q8NAE3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
LINC01555Q8NAE3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC01555Q8NAE3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC01555Q8NAE3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC01555Q8NAE3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC01555Q8NAE3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC01555Q8NAE3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC01555Q8NAE3 AC010141.3-201ENST00000456659 717 ntBASIC21.12■□□□□ 0.97
LINC01555Q8NAE3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.12■□□□□ 0.97
LINC01555Q8NAE3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC01555Q8NAE3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC01555Q8NAE3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC01555Q8NAE3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms