Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC33.68■■■□□ 2.98
CDC42BPAQ5VT25 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
CDC42BPAQ5VT25 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
CDC42BPAQ5VT25 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
CDC42BPAQ5VT25 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC33.68■■■□□ 2.98
CDC42BPAQ5VT25 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC33.68■■■□□ 2.98
CDC42BPAQ5VT25 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CDC42BPAQ5VT25 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC33.67■■■□□ 2.98
CDC42BPAQ5VT25 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CDC42BPAQ5VT25 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC33.67■■■□□ 2.98
CDC42BPAQ5VT25 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
CDC42BPAQ5VT25 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC33.67■■■□□ 2.98
CDC42BPAQ5VT25 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
CDC42BPAQ5VT25 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
CDC42BPAQ5VT25 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CDC42BPAQ5VT25 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC33.66■■■□□ 2.98
CDC42BPAQ5VT25 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC33.66■■■□□ 2.98
CDC42BPAQ5VT25 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CDC42BPAQ5VT25 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
CDC42BPAQ5VT25 AC004812.2-201ENST00000611079 2094 ntBASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 NCF1B-203ENST00000435988 1254 ntBASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 AC006970.2-201ENST00000450065 779 ntBASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC33.65■■■□□ 2.98
CDC42BPAQ5VT25 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC33.64■■■□□ 2.98
CDC42BPAQ5VT25 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDC42BPAQ5VT25 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
CDC42BPAQ5VT25 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDC42BPAQ5VT25 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC33.64■■■□□ 2.98
CDC42BPAQ5VT25 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
CDC42BPAQ5VT25 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CDC42BPAQ5VT25 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
CDC42BPAQ5VT25 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC33.63■■■□□ 2.97
CDC42BPAQ5VT25 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC33.63■■■□□ 2.97
CDC42BPAQ5VT25 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC33.63■■■□□ 2.97
CDC42BPAQ5VT25 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC33.63■■■□□ 2.97
CDC42BPAQ5VT25 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
CDC42BPAQ5VT25 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC33.63■■■□□ 2.97
CDC42BPAQ5VT25 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 GAMT-205ENST00000640762 751 ntTSL 5 BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 AC005224.4-201ENST00000583262 1652 ntBASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 GUSBP6-202ENST00000438529 1198 ntBASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC33.62■■■□□ 2.97
CDC42BPAQ5VT25 KRT87P-202ENST00000534226 1464 ntBASIC33.61■■■□□ 2.97
CDC42BPAQ5VT25 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
CDC42BPAQ5VT25 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC33.61■■■□□ 2.97
CDC42BPAQ5VT25 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC33.61■■■□□ 2.97
CDC42BPAQ5VT25 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
CDC42BPAQ5VT25 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC33.6■■■□□ 2.97
CDC42BPAQ5VT25 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CDC42BPAQ5VT25 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC33.6■■■□□ 2.97
CDC42BPAQ5VT25 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC33.6■■■□□ 2.97
CDC42BPAQ5VT25 WT1-AS_3.1-201ENST00000613262 234 ntBASIC33.6■■■□□ 2.97
CDC42BPAQ5VT25 AL109923.1-201ENST00000618799 583 ntBASIC33.6■■■□□ 2.97
CDC42BPAQ5VT25 AL353803.4-201ENST00000565882 1934 ntBASIC33.6■■■□□ 2.97
CDC42BPAQ5VT25 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CDC42BPAQ5VT25 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 LINC01124-201ENST00000409786 2117 ntBASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 KRT18P11-201ENST00000435214 1283 ntBASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 AC079140.4-201ENST00000507448 529 ntBASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 SPI1-203ENST00000533030 661 ntTSL 2 BASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC33.59■■■□□ 2.97
CDC42BPAQ5VT25 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
CDC42BPAQ5VT25 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC33.58■■■□□ 2.97
CDC42BPAQ5VT25 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC33.58■■■□□ 2.97
CDC42BPAQ5VT25 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC33.58■■■□□ 2.97
CDC42BPAQ5VT25 UBE2DNL-204ENST00000602536 740 ntBASIC33.58■■■□□ 2.97
CDC42BPAQ5VT25 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC33.58■■■□□ 2.97
CDC42BPAQ5VT25 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC33.58■■■□□ 2.97
CDC42BPAQ5VT25 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC33.58■■■□□ 2.97
CDC42BPAQ5VT25 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC33.57■■■□□ 2.96
CDC42BPAQ5VT25 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC33.57■■■□□ 2.96
CDC42BPAQ5VT25 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
CDC42BPAQ5VT25 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
CDC42BPAQ5VT25 SLC7A5P2-201ENST00000553010 536 ntBASIC33.56■■■□□ 2.96
CDC42BPAQ5VT25 AC104187.1-201ENST00000607510 612 ntBASIC33.56■■■□□ 2.96
CDC42BPAQ5VT25 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
CDC42BPAQ5VT25 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC33.56■■■□□ 2.96
CDC42BPAQ5VT25 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CDC42BPAQ5VT25 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms