Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNAI3Q3KNW1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNAI3Q3KNW1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNAI3Q3KNW1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 MIR3181-201ENST00000578512 73 ntBASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNAI3Q3KNW1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19■□□□□ 0.63
SNAI3Q3KNW1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SNAI3Q3KNW1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 LINC00565-201ENST00000562710 2331 ntBASIC19■□□□□ 0.63
SNAI3Q3KNW1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNAI3Q3KNW1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNAI3Q3KNW1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 AC137767.1-201ENST00000602918 1920 ntBASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.98■□□□□ 0.63
SNAI3Q3KNW1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 AC092171.4-201ENST00000609130 632 ntBASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNAI3Q3KNW1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 AC092053.2-201ENST00000640557 1818 ntBASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNAI3Q3KNW1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms