Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
BLOC1S4Q9NUP1 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.57■■□□□ 1.52
BLOC1S4Q9NUP1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.57■■□□□ 1.52
BLOC1S4Q9NUP1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
BLOC1S4Q9NUP1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.57■■□□□ 1.52
BLOC1S4Q9NUP1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BLOC1S4Q9NUP1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BLOC1S4Q9NUP1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
BLOC1S4Q9NUP1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 AL117328.2-201ENST00000624617 1940 ntBASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
BLOC1S4Q9NUP1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 AC011298.3-201ENST00000615796 283 ntBASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
BLOC1S4Q9NUP1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 UNC93B3-201ENST00000308076 687 ntBASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 AC010525.1-201ENST00000585559 441 ntBASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 AC136469.2-201ENST00000623944 1028 ntBASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
BLOC1S4Q9NUP1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 AC080038.3-201ENST00000623346 1952 ntBASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 OR2I1P-207ENST00000453522 948 ntBASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 AL031602.1-201ENST00000633169 911 ntBASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
BLOC1S4Q9NUP1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
BLOC1S4Q9NUP1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
BLOC1S4Q9NUP1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
BLOC1S4Q9NUP1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.51■■□□□ 1.51
BLOC1S4Q9NUP1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
BLOC1S4Q9NUP1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
BLOC1S4Q9NUP1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
BLOC1S4Q9NUP1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
BLOC1S4Q9NUP1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
BLOC1S4Q9NUP1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 CA15P2-201ENST00000611168 834 ntBASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BLOC1S4Q9NUP1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 AC024257.2-201ENST00000549699 147 ntBASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms