Protein–RNA interactions for Protein: Q8TA86

RP9, Retinitis pigmentosa 9 protein, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP9Q8TA86 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.12■□□□□ 0.97
RP9Q8TA86 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RP9Q8TA86 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RP9Q8TA86 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.11■□□□□ 0.97
RP9Q8TA86 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RP9Q8TA86 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RP9Q8TA86 AC129492.7-201ENST00000622992 756 ntBASIC21.11■□□□□ 0.97
RP9Q8TA86 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RP9Q8TA86 AC244015.2-201ENST00000616358 1861 ntBASIC21.11■□□□□ 0.97
RP9Q8TA86 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RP9Q8TA86 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RP9Q8TA86 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.1■□□□□ 0.97
RP9Q8TA86 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.1■□□□□ 0.97
RP9Q8TA86 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.1■□□□□ 0.97
RP9Q8TA86 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RP9Q8TA86 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP9Q8TA86 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.1■□□□□ 0.97
RP9Q8TA86 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.09■□□□□ 0.97
RP9Q8TA86 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.09■□□□□ 0.97
RP9Q8TA86 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.09■□□□□ 0.97
RP9Q8TA86 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.09■□□□□ 0.97
RP9Q8TA86 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RP9Q8TA86 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 LINC01960-201ENST00000563759 1884 ntBASIC21.09■□□□□ 0.97
RP9Q8TA86 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RP9Q8TA86 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.08■□□□□ 0.97
RP9Q8TA86 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RP9Q8TA86 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RP9Q8TA86 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RP9Q8TA86 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RP9Q8TA86 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RP9Q8TA86 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RP9Q8TA86 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RP9Q8TA86 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.08■□□□□ 0.97
RP9Q8TA86 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
RP9Q8TA86 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RP9Q8TA86 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.08■□□□□ 0.97
RP9Q8TA86 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RP9Q8TA86 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
RP9Q8TA86 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RP9Q8TA86 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RP9Q8TA86 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
RP9Q8TA86 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP9Q8TA86 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RP9Q8TA86 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RP9Q8TA86 LINC01529-204ENST00000636474 1715 ntBASIC21.07■□□□□ 0.96
RP9Q8TA86 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP9Q8TA86 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP9Q8TA86 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.07■□□□□ 0.96
RP9Q8TA86 MIR4281-201ENST00000580852 62 ntBASIC21.07■□□□□ 0.96
RP9Q8TA86 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.07■□□□□ 0.96
RP9Q8TA86 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RP9Q8TA86 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP9Q8TA86 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP9Q8TA86 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP9Q8TA86 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP9Q8TA86 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RP9Q8TA86 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RP9Q8TA86 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RP9Q8TA86 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.06■□□□□ 0.96
RP9Q8TA86 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RP9Q8TA86 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RP9Q8TA86 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RP9Q8TA86 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RP9Q8TA86 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RP9Q8TA86 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RP9Q8TA86 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RP9Q8TA86 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RP9Q8TA86 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.05■□□□□ 0.96
RP9Q8TA86 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.05■□□□□ 0.96
RP9Q8TA86 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.05■□□□□ 0.96
RP9Q8TA86 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RP9Q8TA86 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RP9Q8TA86 KRT18P24-201ENST00000344739 1156 ntBASIC21.05■□□□□ 0.96
RP9Q8TA86 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RP9Q8TA86 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.05■□□□□ 0.96
RP9Q8TA86 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.05■□□□□ 0.96
RP9Q8TA86 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RP9Q8TA86 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.05■□□□□ 0.96
RP9Q8TA86 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
RP9Q8TA86 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RP9Q8TA86 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RP9Q8TA86 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RP9Q8TA86 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms