Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CSNK1G1Q9HCP0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G1Q9HCP0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.22■■□□□ 1.31
CSNK1G1Q9HCP0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.22■■□□□ 1.31
CSNK1G1Q9HCP0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G1Q9HCP0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.22■■□□□ 1.31
CSNK1G1Q9HCP0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G1Q9HCP0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G1Q9HCP0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CSNK1G1Q9HCP0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.21■■□□□ 1.31
CSNK1G1Q9HCP0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.21■■□□□ 1.31
CSNK1G1Q9HCP0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CSNK1G1Q9HCP0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.21■■□□□ 1.31
CSNK1G1Q9HCP0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.21■■□□□ 1.31
CSNK1G1Q9HCP0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.21■■□□□ 1.31
CSNK1G1Q9HCP0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 TSPY26P-201ENST00000476365 1326 ntBASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 AC068587.7-201ENST00000641602 218 ntBASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
CSNK1G1Q9HCP0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G1Q9HCP0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 DUSP8P5-201ENST00000422884 1815 ntBASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.18■■□□□ 1.3
CSNK1G1Q9HCP0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CSNK1G1Q9HCP0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSNK1G1Q9HCP0 IRS3P-201ENST00000223076 1006 ntBASIC23.17■■□□□ 1.3
CSNK1G1Q9HCP0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSNK1G1Q9HCP0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.17■■□□□ 1.3
CSNK1G1Q9HCP0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSNK1G1Q9HCP0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.17■■□□□ 1.3
CSNK1G1Q9HCP0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSNK1G1Q9HCP0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.16■■□□□ 1.3
CSNK1G1Q9HCP0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSNK1G1Q9HCP0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSNK1G1Q9HCP0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSNK1G1Q9HCP0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CSNK1G1Q9HCP0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSNK1G1Q9HCP0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.15■■□□□ 1.3
CSNK1G1Q9HCP0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CSNK1G1Q9HCP0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.14■■□□□ 1.3
CSNK1G1Q9HCP0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CSNK1G1Q9HCP0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.14■■□□□ 1.29
CSNK1G1Q9HCP0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CSNK1G1Q9HCP0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.13■■□□□ 1.29
CSNK1G1Q9HCP0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CSNK1G1Q9HCP0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
CSNK1G1Q9HCP0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CSNK1G1Q9HCP0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CSNK1G1Q9HCP0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.13■■□□□ 1.29
CSNK1G1Q9HCP0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
CSNK1G1Q9HCP0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms