Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCRT1Q9BWW7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SCRT1Q9BWW7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCRT1Q9BWW7 AL157384.1-201ENST00000445995 2473 ntBASIC17.64■□□□□ 0.42
SCRT1Q9BWW7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 DUX4L9-201ENST00000449051 1259 ntBASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 AC007952.6-201ENST00000573168 2673 ntBASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 AC003957.1-201ENST00000625108 2673 ntBASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.64■□□□□ 0.41
SCRT1Q9BWW7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 AC010542.4-201ENST00000563151 1910 ntBASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCRT1Q9BWW7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 AL391422.3-201ENST00000603791 2761 ntBASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCRT1Q9BWW7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 LINC01521-201ENST00000504184 1943 ntBASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.61■□□□□ 0.41
SCRT1Q9BWW7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SCRT1Q9BWW7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCRT1Q9BWW7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.58■□□□□ 0.41
SCRT1Q9BWW7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SCRT1Q9BWW7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCRT1Q9BWW7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCRT1Q9BWW7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCRT1Q9BWW7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms